| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1540 |
|---|
| Symbol | |
|---|
| ID | 7110597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 1698592 |
|---|
| End bp | 1700205 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643479804 |
|---|
| Product | NAD(P)H-quinone oxidoreductase subunit 4 |
|---|
| Protein accession | YP_002376848 |
|---|
| Protein GI | 218438519 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 0.3577 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTTG AGAATTTTCC TTGGTTAACT ACAATTATTC TTTTTCCGGT CGTTGCTTCA
CTGTTAATCT TCCTATTTCC CAGTGAAGGA TCGGAAGCAG TTCAAGTCAA AACAGCCCGC
AGAGTACGAT GGTATGCTCT GATTATCGGA TTAATTGATT TTGTCCTGAT TGTCTATGCC
TTTTATACTG GCTATGATTT CAGTAATCCG GATCTGCAAT TGGTAGAAAG CTACAATTGG
CTGCCAGAAT TAGATTTAAA GTGGTCAGTC GGAGCAGATG GGCTTTCTAT GCCTCTGATC
TTACTCACGG GCTTTATTAC CACCCTAGCG ATGCTTGCCG CTTGGCCAGT CACCCTCAAG
CCTAGATTAT TCTATTTCTT GATGCTGGCT ATGTATGGGG GACAAATTGC GGTTTTTGCC
GTGCAAGATA TTCTCTTGTT TTTCTTGGTT TGGGAATTAG AGTTAATTCC GGTGTATCTG
CTGTTGGCCA TTTGGGGGGG TAAACGTCGC CTCTATGCCT CAACGAAGTT TATTATCTAT
ACTGCCGGCG GATCTTTGTT TATTCTCGTC GCCGGGTTAA CGATGGCCTT TTATGGCGGT
GATCTCACCT TTGATATGCG GGCGATCGCA GCGAAAGAAT ACGCCCTGAA TTTACAATTG
TGGCTGTATG CGGCCTTCTT TATCGCCTAT GCAGTTAAGT TACCCATTTT CCCTCTTCAT
ACATGGTTAC CGGATGCACA CGGAGAAGCG ACGGCTCCGG TGCATATGTT ACTGGCAGGT
ATCCTCTTAA AAATGGGGGG ATATGCTCTC GTGCGGATGA ATGCGGGGAT GTTACCCGAT
GCTCACGCGG TTTTTGCTCC CATTTTAGTG ATTTTGGGGG TAGTTAATAT TGTCTATGCG
GCGTTAACGT CTTTTGCTCA ACGAAACCTG AAACGAAAAA TCGCCTATTC TTCGATTTCT
CACATGGGTT TTGTCTTGAT CGGACTTGCT TCGTTTACCG ATATTGGTTT GAGTGGGGCT
GTTTTACAGA TGATTTCTCA CGGACTGATC GGGGCGAGTT TATTCTTTAT GGTGGGAGCT
ACCTACGATC GGACTCATAC CCTCATGTTG GATGAGATGG GAGGCGTAGG GCAAAAGATG
AAGAAAATGT TTGCTATGTG GACGACTTGT TCGATGGCTT CTTTAGCGTT GCCTGGAATG
AGTGGATTTG TAGCAGAATT AATGGTCTTT ATTGGGTTTG CCACCAGCGA TGCCTATAAT
ACGACTTTTC GGGTGATCAT GGTCTTTTTA GCTGCTATTG GGGTAATTAT TACTCCTATT
TATCTTCTGT CGATGTTGAG AGAGATGCTT TATGGGCCGG AAAATAAAGA ACTGGTTTCC
CATCAGGCTT TAATTGATGC TGAACCGAGA GAAGTGTTTA TTATTGCTTG TTTGTTAGTT
CCCATTATCG GTATTGGATT TTATCCGAAA ATTGTTACCG AAATTTATGA TTCAACTACG
AATAAATTGA CCGCACGGTT ACGGGAATCT GTGCCTAGTT TAGTCCAACA AGCTTCTAAA
ACACCGATGG AAAAATTGGC ACTTCGAGCG CCCATTATTC CCAGTCAGTA TTAA
|
|---|
| Protein sequence | MNVENFPWLT TIILFPVVAS LLIFLFPSEG SEAVQVKTAR RVRWYALIIG LIDFVLIVYA
FYTGYDFSNP DLQLVESYNW LPELDLKWSV GADGLSMPLI LLTGFITTLA MLAAWPVTLK
PRLFYFLMLA MYGGQIAVFA VQDILLFFLV WELELIPVYL LLAIWGGKRR LYASTKFIIY
TAGGSLFILV AGLTMAFYGG DLTFDMRAIA AKEYALNLQL WLYAAFFIAY AVKLPIFPLH
TWLPDAHGEA TAPVHMLLAG ILLKMGGYAL VRMNAGMLPD AHAVFAPILV ILGVVNIVYA
ALTSFAQRNL KRKIAYSSIS HMGFVLIGLA SFTDIGLSGA VLQMISHGLI GASLFFMVGA
TYDRTHTLML DEMGGVGQKM KKMFAMWTTC SMASLALPGM SGFVAELMVF IGFATSDAYN
TTFRVIMVFL AAIGVIITPI YLLSMLREML YGPENKELVS HQALIDAEPR EVFIIACLLV
PIIGIGFYPK IVTEIYDSTT NKLTARLRES VPSLVQQASK TPMEKLALRA PIIPSQY
|
|---|
| |