Gene PCC7424_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1501 
Symbol 
ID7110558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp1650592 
End bp1652517 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content44% 
IMG OID643479766 
ProductCarbohydrate-selective porin OprB 
Protein accessionYP_002376810 
Protein GI218438481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.95418e-24 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTTGAAAC TCTTCTGGAA ATCTCTGCTG GTTAGTCCAG CTATTCTAGG GGCAGTCTTA 
GCAATAGCAT CCAACGCTAC TGCTACAGAA AGTGCAAGCA AGACAGAAAC CCTACAGACA
GAATCTTTAA ATTTTGAATT ATCCGAAATT CAACCCGATT ATGTTGCCCA AAGCAATGAT
CAGCTATTGG AGCAAATGGA ACAATACGGG AGTGAAGGGG TAATTAATAA CCAAGGTCAA
GTAACCAACG TAAACCAACT GCGAGATGTT GAACCCACCG CTTGGGCTTA TGAAGCGTTA
CGAAGCTTAG TAGAACGCTA TGGATGTATC GTCGGTTATC CAGACCGGAC ATTCCGAGGC
GATCGCGCTT TAACCCGTTG GGAATTTGCC GCAGGTTTAA ACGCTTGTTT AAACGTAATG
GAGCGTTTAA TTCAAGAAGG AATTGCGGTG GTACGGGAAG ACCTGGAAAA ACTCAAACGG
TTAATGCAGG AATTTGAAGC AGAATTAGCC GCTTTAGGAG CAAGAGTTGA TAATTTAGAA
GCACGGGTAT CGTTCTTAGA AGATAACCAA TTCTCCACAA CGACCAAATT ACAAGGGGAA
GTTATCTTTG CTCTGAGTGA TACCTTTGGG GAAAACTCTA ACGGAACACG CAGAGATACT
CAAAGCGTAT TCCAAGACCG GGTTCGTTTA AACTTTAACA CCAGTTTCAC AGGACAAGAC
CGATTAGTCA CTCGTTTATC GGCAGGGACA GGGGTATTAT TTGGGCGGGA TTACAGAACC
ACCTTTGCCG ACAAGGATGG ACGGTTCAGA ACGGCTCAGT ATGATAACCT CCAAAGCCCC
AGCTATGTTC AAACCTGGCA GATTACTCCC AGTACAGATA ACGACATTTT CGTAGACTGG
TTAGCTTACT ACGCGCCGGT TGAAATTAGT GACAATTTTG TCTTAAACAC CTACGTTGCG
GCTTGGGGTG GTATCTGGGC TGACTTCGTT CCTACTTTAA ATCCTTACTT TGAAGACTTT
GACGGTGGTA ACGGTGCTTT AAGTGCTTTT GCTCAAAGAA ACCCCATCTA TAACATTGGG
GGTGGTGCTG GTGCTGGGTT TAGCCTTCGA CTAGGTTTCT TAGAAAGCCT TCTCGGTCCA
ACCACATTGA GCGCAGGTTA TTTAGGGGCT GAACCGAATG ATCCTCAACC GGGTAATGGT
ATTTTCAACG GTGACTATGC GGCTCTAGCG CAACTTAACT TCAATTTATT CAATAGAGTT
AACCTAGGTT TCACCTATGT CAACGCTTAC CATAGTTCAG AGAGTGCTAT TTTCGGTCAA
GGCAAGGGCT TTACTGATAA CAACGTTGGT ACATCAGGGA CTCCTCTAGC TAACTTGTCT
CAAAATCAGC TTAGAACTGC CTTTGATGAC GGGACTGTCG ATTTTGATAC TACCGGTAGT
GATTACATTA GTAGAGGTGT TGTTGAGGGT CCAGGTCCTA GTGAAGGATT CATCAATGAT
ATTGAGCCGT TTAACTTCCG TCAAAAAGTC ACCAATAGCG TTGGGGGTCA ATTAGCGGTT
GCGATTACCG ATTGGTTGAG CTTCAGTGCT TTTGGAACTT ACACGGATGT TAAACTTCTC
GGTCGTGGAG ATGCAGAAAT CTGGACTTAT GGCGGTGGCT TTGCCTTCCC TGACTTAGGA
AAAGAAGGTA ACTTGTTAGG GATTTTCGCT GGTGTGCAGC CTTATCTATC CAATGTAGAT
CTTGACAATG TTAACTTTTT AGGATATGAG GATTGGAATC CCGTTCACGT AGAACTATTC
TATCGCTATC AACTGAACGA TAACATTTCT TTAACTCCTG GTGTGATCTG GATTTCTAAG
CCTTCACAAG CTAAACAAAC AGTAGACGAA GTCATTGGGA CTTTACGCGG TACTTTCACT
TTCTAA
 
Protein sequence
MLKLFWKSLL VSPAILGAVL AIASNATATE SASKTETLQT ESLNFELSEI QPDYVAQSND 
QLLEQMEQYG SEGVINNQGQ VTNVNQLRDV EPTAWAYEAL RSLVERYGCI VGYPDRTFRG
DRALTRWEFA AGLNACLNVM ERLIQEGIAV VREDLEKLKR LMQEFEAELA ALGARVDNLE
ARVSFLEDNQ FSTTTKLQGE VIFALSDTFG ENSNGTRRDT QSVFQDRVRL NFNTSFTGQD
RLVTRLSAGT GVLFGRDYRT TFADKDGRFR TAQYDNLQSP SYVQTWQITP STDNDIFVDW
LAYYAPVEIS DNFVLNTYVA AWGGIWADFV PTLNPYFEDF DGGNGALSAF AQRNPIYNIG
GGAGAGFSLR LGFLESLLGP TTLSAGYLGA EPNDPQPGNG IFNGDYAALA QLNFNLFNRV
NLGFTYVNAY HSSESAIFGQ GKGFTDNNVG TSGTPLANLS QNQLRTAFDD GTVDFDTTGS
DYISRGVVEG PGPSEGFIND IEPFNFRQKV TNSVGGQLAV AITDWLSFSA FGTYTDVKLL
GRGDAEIWTY GGGFAFPDLG KEGNLLGIFA GVQPYLSNVD LDNVNFLGYE DWNPVHVELF
YRYQLNDNIS LTPGVIWISK PSQAKQTVDE VIGTLRGTFT F