Gene PCC7424_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1488 
Symbol 
ID7108425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp1636617 
End bp1637690 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content39% 
IMG OID643479753 
Productglucose-1-phosphate thymidyltransferase 
Protein accessionYP_002376797 
Protein GI218438468 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form
[TIGR01208] glucose-1-phosphate thymidylylransferase, long form 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.000000150762 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGCAC TTATATTATC AGGCGGTAAA GGTACAAGAT TACGCCCCTT AACTTACACT 
GGGGCAAAGC AATTAGTTCC TGTTGCTAAT AAACCTATTT TATGGTACGG AATAGAATCT
ATTGTTGCTG CTGGAATTAC AGATATTGGG ATTATCATTA GTCCTGAAAC CGGTCAAGAA
GTTCAAGCTA AAACCGGCGA TGGGGAACGT TTTGGCGCAA GAATTACTTA TATTCTCCAA
GACCAACCTT TAGGGTTAGC CCATGCGGTT AAAATTGCTC AACCCTTTTT AGGGGATTCT
CCTTTTATTA TGTATTTAGG AGATAACCTG ATTCAAGATG ATGTTAATCC CTTTGTAGAA
ACTTTTAAAA CTCAACACTT AGACGCTTTA ATTCTCTTGA GAACGGTTTC TAATCCCAGT
GCTTTTGGGG TAGCGAAAGT CGATGAAAAA GGACGAGTTT TACAGTTAAT TGAAAAACCT
AAAGAACCTC CTTCTAATTT AGCTTTAGTG GGAATTTATC TATTTTCTCC TACCATTCAT
GAGGCGATCG CAGCGATTAA CCCGTCTGCC AGAGGAGAAT TAGAAATTAC CGATGCGATT
CAAGAATTAC TGAATCGAAA AGCACCGGTA GAAGCCTTAC AACTGAAAGG ATGGTGGTTA
GATACAGGGA AAAAAGATGA TTTATTAGAA GCTAACCGCA TTATTTTAGA TACTTGTTTA
CAAATCTCTA AAAATGGAGA GATTGATGAT AATAGTCAAG TGATTGGACG GGTAAAAATC
GGCACAGGGT CTAAAATTCT TAATAGTACC ATTCGCGGGC CGGTTGTCAT CGGCGATAAC
TGTCACATTG AAAATTGTTT TATCGGCCCC TATAGCAGTA TTGCGGATGA AGTTATTCTT
AAAGATGCTG ATATTGAGCA TAGTGTAATT TTACAGAAAG CGTCTTTAAT TGGGATTAAA
CAAAGAATTG TTGATAGCGT TATAGGACAA CGGGCTAAAC TAGAACCCGC CCCCCAACGT
CCGATCGCTT TACGCTTTAT GATTGGCGAT GATTCTCACA TTGAATTAGC ATAA
 
Protein sequence
MKALILSGGK GTRLRPLTYT GAKQLVPVAN KPILWYGIES IVAAGITDIG IIISPETGQE 
VQAKTGDGER FGARITYILQ DQPLGLAHAV KIAQPFLGDS PFIMYLGDNL IQDDVNPFVE
TFKTQHLDAL ILLRTVSNPS AFGVAKVDEK GRVLQLIEKP KEPPSNLALV GIYLFSPTIH
EAIAAINPSA RGELEITDAI QELLNRKAPV EALQLKGWWL DTGKKDDLLE ANRIILDTCL
QISKNGEIDD NSQVIGRVKI GTGSKILNST IRGPVVIGDN CHIENCFIGP YSSIADEVIL
KDADIEHSVI LQKASLIGIK QRIVDSVIGQ RAKLEPAPQR PIALRFMIGD DSHIELA