Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1488 |
Symbol | |
ID | 7108425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 1636617 |
End bp | 1637690 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643479753 |
Product | glucose-1-phosphate thymidyltransferase |
Protein accession | YP_002376797 |
Protein GI | 218438468 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.000000150762 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGCAC TTATATTATC AGGCGGTAAA GGTACAAGAT TACGCCCCTT AACTTACACT GGGGCAAAGC AATTAGTTCC TGTTGCTAAT AAACCTATTT TATGGTACGG AATAGAATCT ATTGTTGCTG CTGGAATTAC AGATATTGGG ATTATCATTA GTCCTGAAAC CGGTCAAGAA GTTCAAGCTA AAACCGGCGA TGGGGAACGT TTTGGCGCAA GAATTACTTA TATTCTCCAA GACCAACCTT TAGGGTTAGC CCATGCGGTT AAAATTGCTC AACCCTTTTT AGGGGATTCT CCTTTTATTA TGTATTTAGG AGATAACCTG ATTCAAGATG ATGTTAATCC CTTTGTAGAA ACTTTTAAAA CTCAACACTT AGACGCTTTA ATTCTCTTGA GAACGGTTTC TAATCCCAGT GCTTTTGGGG TAGCGAAAGT CGATGAAAAA GGACGAGTTT TACAGTTAAT TGAAAAACCT AAAGAACCTC CTTCTAATTT AGCTTTAGTG GGAATTTATC TATTTTCTCC TACCATTCAT GAGGCGATCG CAGCGATTAA CCCGTCTGCC AGAGGAGAAT TAGAAATTAC CGATGCGATT CAAGAATTAC TGAATCGAAA AGCACCGGTA GAAGCCTTAC AACTGAAAGG ATGGTGGTTA GATACAGGGA AAAAAGATGA TTTATTAGAA GCTAACCGCA TTATTTTAGA TACTTGTTTA CAAATCTCTA AAAATGGAGA GATTGATGAT AATAGTCAAG TGATTGGACG GGTAAAAATC GGCACAGGGT CTAAAATTCT TAATAGTACC ATTCGCGGGC CGGTTGTCAT CGGCGATAAC TGTCACATTG AAAATTGTTT TATCGGCCCC TATAGCAGTA TTGCGGATGA AGTTATTCTT AAAGATGCTG ATATTGAGCA TAGTGTAATT TTACAGAAAG CGTCTTTAAT TGGGATTAAA CAAAGAATTG TTGATAGCGT TATAGGACAA CGGGCTAAAC TAGAACCCGC CCCCCAACGT CCGATCGCTT TACGCTTTAT GATTGGCGAT GATTCTCACA TTGAATTAGC ATAA
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Protein sequence | MKALILSGGK GTRLRPLTYT GAKQLVPVAN KPILWYGIES IVAAGITDIG IIISPETGQE VQAKTGDGER FGARITYILQ DQPLGLAHAV KIAQPFLGDS PFIMYLGDNL IQDDVNPFVE TFKTQHLDAL ILLRTVSNPS AFGVAKVDEK GRVLQLIEKP KEPPSNLALV GIYLFSPTIH EAIAAINPSA RGELEITDAI QELLNRKAPV EALQLKGWWL DTGKKDDLLE ANRIILDTCL QISKNGEIDD NSQVIGRVKI GTGSKILNST IRGPVVIGDN CHIENCFIGP YSSIADEVIL KDADIEHSVI LQKASLIGIK QRIVDSVIGQ RAKLEPAPQR PIALRFMIGD DSHIELA
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