Gene PCC7424_1446 details

Gene Information

• Locus tag: PCC7424_1446
• ID: 7108382
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: +
• Start bp: 1591089
• End bp: 1593014
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 643479711
• Product: sodium/hydrogen exchanger
• Protein accession: YP_002376756
• Protein GI: 218438427
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters; [COG0569] K+ transport systems, NAD-binding component

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 83
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAAGGAT CTTTTGAATT AACCCTGCAA ATCGTCATTA CCGTTATTGC AGGGATCAGC 
GCCCAAGTTA TTGCGGAATA CCTTAAAGTT CCTAGCATTG TTTTTTTGCT CCTGTTTGGC 
ATCATGCTAG GCCCTGATGG CTTCAATTTT CTCCACCCCC ATCATCTGGG AGTCGGTTTA 
GAAGTTTTAG TTGCCCTTTC TGTCGCCATT ATTTTATTTG AGGGAGGACT GAATTTAGGG 
TTACGAGATT TAGGGCGGGT TTCTGGCAGT TTACGCAATC TCGTTACCAT CGGCACGTTG 
ATCACCTTAA TTGGAGGTGG TATGGCCGCC CACTGGTTAG CCGAATTTCC TTGGTCGATC 
GCTTTTCTGT ATGCGTCTTT GGTGGTCGTT ACCGGCCCAA CGGTCATCGG GCCGTTACTC 
AAACAAGTTC AAGTCGATCG ACAGGTGGCC ACCTTACTCG AAGGAGAAGG GGTTCTCATC 
GACCCTGTGG GGGCTATTTT AGCGGTTGTT GTTTTAGATA CGATCATTAA TAGTCATGCT 
AGCCCGATCG AAATTATTAA CGGCCTCATG TTACGGTTGG GCATTGGGGC AATTATTGGC 
GGGGGATGTG GTTGGTTACT GAGTGTGTTT CTCAAGCGGG CGAGTTTTGT TTCGGAAGAT 
TTGAAGAATT TAGTGGTTCT GGCTGGAGTT TGGGGGTTAT TTGGCTTATC TCAGATGCTT 
CGCAGTGAAT CGGGCTTAAT GGCTACAGTA GTCGCTGGAA TTGTCTTAAG AGCTTCTGCT 
CTGCCAGAAG AACGATTATT GAGGCGATTT AAAGGTCAGT TAACCATTTT GTGTGTTTCT 
GTCCTATTTA TTCTGTTATC GGCGGATCTG TCTATTGCGA GTATTTTTGC TTTGGGATGG 
GGCAGTGTCT TAGCGGTATT AGTCCTGATG TTGCTGATTC GTCCCCTGAG TGTCGCTGTC 
TGTACCCTCA AAAGTGGTTT AAACTGGCGA CAAAAGTTAT TTGTAGCTTG GGTTGCTCCC 
AAAGGGATTG TCTCCGCTTC TGTGGCTTCT CTATTTGCTA TTTTACTGAC TAGCGCCGGG 
ATTAATGGGG GAGACTCCAT TAAAGCTCTC GTTTTCTTGA CGATTATGAT GACGGTGTTT 
ATTGAGGGGT TATCGGCGAG ATGGGTCGCC AAATGCTTAA AAATTACCTC GGCTGAAGCC 
ACAGGAGCGG TTATTATTGG CTGTAATCCT CTAGGACGAC TAATTGCTCG TTTATTCCAA 
GAACGGGGAG AGTCTGTGGT CTTAATTGAT ACTGATCCTG AAGCCTGTCA AAAAGCCGAA 
GAAGAAAATT TACCCGTTTT TCAGAGTAGC GGATTAGATG CAGATGTCTT AGAAGAAGCG 
GGCATTAGTT CGATGGGAAC GTTTATGGCT CTGACCAGTA ATGGTGAGGT AAATTTAGTT 
TTAGCTCAAA GAGCCGTAGA AGAGTTTGAG CCTCCGCGAG TTTTGGCGGT ATTCCCTCGA 
AATACGGGCA CAAATTCCCC CAATCAAAAT AAAACTAAAG TCAATCAAGC GTTTATTGAA 
CAAGTCCCCA TTAAAACCTG GAATCAATAC ATTACTGAAG GACAAATTAA ATTAGGAAAA 
ACCATCCTCA AACAGCCAGA ATTTTCCTTA CAACAAGCTC ACTTACAAGC ATTGATCCGT 
GCCGGGGAGC TATTACCCTT ACTCCTGTTA CGGGATAATA ATCTTCAAGT GGTGACTCCT 
TCAGAATCTT GGCAACTGAA AGATGAACTG ATTTATCTGT TACACGATCC ACGACCTAAA 
CTGCTCAAAC GCCTCTCCGG CGGTCTTCAG TCAACTCGCT TGGCCCTAGA ACAACTTCCT 
GAAGTTGAAG AGTTGCCCAT TGCTGCGCCT GTGAGTGAAT CTGAACTAGA TCCGATTACA 
AAATAA 

 

Protein sequence

MEGSFELTLQ IVITVIAGIS AQVIAEYLKV PSIVFLLLFG IMLGPDGFNF LHPHHLGVGL 
EVLVALSVAI ILFEGGLNLG LRDLGRVSGS LRNLVTIGTL ITLIGGGMAA HWLAEFPWSI 
AFLYASLVVV TGPTVIGPLL KQVQVDRQVA TLLEGEGVLI DPVGAILAVV VLDTIINSHA 
SPIEIINGLM LRLGIGAIIG GGCGWLLSVF LKRASFVSED LKNLVVLAGV WGLFGLSQML 
RSESGLMATV VAGIVLRASA LPEERLLRRF KGQLTILCVS VLFILLSADL SIASIFALGW 
GSVLAVLVLM LLIRPLSVAV CTLKSGLNWR QKLFVAWVAP KGIVSASVAS LFAILLTSAG 
INGGDSIKAL VFLTIMMTVF IEGLSARWVA KCLKITSAEA TGAVIIGCNP LGRLIARLFQ 
ERGESVVLID TDPEACQKAE EENLPVFQSS GLDADVLEEA GISSMGTFMA LTSNGEVNLV 
LAQRAVEEFE PPRVLAVFPR NTGTNSPNQN KTKVNQAFIE QVPIKTWNQY ITEGQIKLGK 
TILKQPEFSL QQAHLQALIR AGELLPLLLL RDNNLQVVTP SESWQLKDEL IYLLHDPRPK 
LLKRLSGGLQ STRLALEQLP EVEELPIAAP VSESELDPIT K