Gene PCC7424_1222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1222 
Symbol 
ID7112355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp1340783 
End bp1341874 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content37% 
IMG OID643479490 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_002376538 
Protein GI218438209 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGTTC AATTAGTTGA TGTTTCTAAA AGTTTTAAAG GAAGTCACCA TAAAGACTTT 
TTAGCAGTAG AGCAAATTAA TTTAGAGATA TCTGGAGGAG AATTTTTTTC CTTGTTAGGG 
CCTTCGGGAT GTGGAAAAAC AACGACTTTA AGAATGATAG CAGGGTTTGA GTTGCCTACA 
AAAGGGGAAA TTTATATCGA GGGACAACCT ATGGGAAAAC GTCCTCCTTT TCATCGTCCG 
GTTAATACCG TTTTTCAAAA TTATGCGCTT TTTCCTCATT TAACTGTCGC TGAAAATATA 
GCCTTTGGGT TAGAAATGGA CAAGCTTCCT CGGACTCAAA TTCGGACTTT AATCACAGAA 
GTTTTAGAAA TGGTCAAGTT AGCTGGATAC GAAAAACGCT ATCCCCGACA ATTATCAGGA 
GGACAACAAC AACGAGTCGC TTTAGCGCGA TCGCTGGTGA AAAAACCAAA GGTACTCTTA 
TTAGATGAAC CTCTCGGTGC TTTAGATTTA AAATTGCGGA AACAAATGCA GTTAGAATTA 
AAATATATGC AGCAACAGGT AGGCATTACT TTTATTTATG TCACCCACGA TCAAGAAGAA 
GCTTTAACGA TGTCTGATCG GATCGGAGTG ATGAATAAAG GGAAAATTTT ACAAGTGGGA 
ACTCCTGTAG AAATTTATGA AGAACCCTCA TCCCATTTTG TTGCTGATTT TATTGGAGAG 
ACTAATATTT TAACCGGACA AGTCGTCAAA CAATTAGAAG AAGAGTTAAT TGTTTTAGTC 
GATAATCAAT TATTAGTGAC AGTTCCCTAT GACCAAAAAT TATCAATAAA TCAACAAGTT 
AATCTGATCA TTCGTCCTGA AAAAGCGACT CTTTATCCGG CGAGTTATGA CGATCCATCG 
AGTTGGTTAG GAACAGTAGA AGAAGTTGTC TATATCGGAA CAGATACTCG ATATTTGGTT 
CGACTAACGG AACAAAATGT TATTACAATT CGACAGCAAA ATATACATCG GAGTTCTCTT 
GAACATTATC AAACCGGAGA ACAAGTTAAA GTTAAAGTAT CTGCCGATAG TATTCGCCTT 
TTGTTAGATT AA
 
Protein sequence
MGVQLVDVSK SFKGSHHKDF LAVEQINLEI SGGEFFSLLG PSGCGKTTTL RMIAGFELPT 
KGEIYIEGQP MGKRPPFHRP VNTVFQNYAL FPHLTVAENI AFGLEMDKLP RTQIRTLITE 
VLEMVKLAGY EKRYPRQLSG GQQQRVALAR SLVKKPKVLL LDEPLGALDL KLRKQMQLEL 
KYMQQQVGIT FIYVTHDQEE ALTMSDRIGV MNKGKILQVG TPVEIYEEPS SHFVADFIGE 
TNILTGQVVK QLEEELIVLV DNQLLVTVPY DQKLSINQQV NLIIRPEKAT LYPASYDDPS 
SWLGTVEEVV YIGTDTRYLV RLTEQNVITI RQQNIHRSSL EHYQTGEQVK VKVSADSIRL 
LLD