Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1164 |
Symbol | |
ID | 7112293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 1272903 |
End bp | 1274306 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643479431 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002376483 |
Protein GI | 218438154 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.748472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGGGGG GATGGGGCTG GAATTGGTGG ACATCGAGTC GAGGTGGACA AAGTCCTCCA GGCGCATTGG CTGGACAACC CCAAGCCGTC CCCGTAAAAT TAACGACCTT ACAAACCGAA ACAATTCAAA AAAGTATAGA AGTTTTAGGA TCTTTAGAAG CTCGTCGCGC CGTGACACTT AAACCAGAAG TCGATGGACG AGTCAATGAA GTTTTAGTGT CAGACGGCGA TCGAGTTCAA GCCGGACAAG CGATCGTGAG TTTGGATAGC CAAGACTTAG AGGCAGACTT GTATATTGCC CAAGCTAGGC TAGATAATGC TAAATCCAGA CTAGGGTTAC TCGAAGCGGG GAGTCGAATT GAAGATATTG CAGAAGCCAG AGCTAATTTA GCCCAAGCTC AAGCCCGTTT AGCAGATGCT AAAAGAGGGG CAAGACCGGA AGAAATTGCT CAGGCAGAAG CTCAATTAGA TTCGGCACAA GCAGAGGCAG ATTTAGCTCA GGATCGGGCA AAACGATATG ATAAATTACA GCAAGAAGGA GCGGTATCTT TTGATGAATA TCAGGGATAT CTCCAAGAGG CCAGAAGTGC CACCGCAGCA GTCACAGAAG CGGAACGGCG TTTAGCCCAA CTCAAAAAAG GTCGGCAATC CGATATTGAA GCTCAGTCTG CCCAAGTGGA GCAAGCTCGG CAAAATTTAA TCCGATTCCA AAACGGGCCA CGGGTTGAAG AAATCGCTCA AGCTAGGGCA GAAGTAGCAG AAGCTCAGGC TCAAGTGCAA ATGGCACAAG TTGAATTAGA TAAAACTCGT ATTAAAGCTC CCTTTGACGG GGTTATTGGG GATATACCGG TTAAGATAGG AGATTATGTC GGGGAAGGAG ACGAGTTAAC GACAATTACG GAAAATAACG TTTTAGAAGT TAATCTTCAA GTTCCGATTC AGTATAAACA AAATCTTCGT TTAGGATTAC CCGTAGAAAT TTTTAATACA CAAAATCAGG TAATTACTAG GGGAAAAATT AGTTTTATTG CCCCTAATGT TAGTTCTAAT TCTCAGTTAA TTTTAGTTAA AGCGACCATT CCTAATGTTT TAGGAGAATT GCTTAATCTT CAATTTATTC AAGGCAGAAT TATTTTTGAT GAAAAGCCCG GTATTTTAGT GCCGACGGCG GCGATTTCTC GTATTGGAGG AGAAACCTTT GTCTTTGTGG CCACTCAAGC TCCAGACTCA GGGAATAATA AGGAAAATGC TCCGACTTTA ATTGTCAAGC AAAGGTCTGT GGAGTTAGGG GAGTTACAGG GCAATAGTTA TCAAGTTTTA GAAGGATTAG AACCAGGAGA AAGAATCGTC ACCGCCGGAA TTCTCAATTT ACAGGATGGA GCGCCCATTA TTCCACAACC TTAA
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Protein sequence | MGGGWGWNWW TSSRGGQSPP GALAGQPQAV PVKLTTLQTE TIQKSIEVLG SLEARRAVTL KPEVDGRVNE VLVSDGDRVQ AGQAIVSLDS QDLEADLYIA QARLDNAKSR LGLLEAGSRI EDIAEARANL AQAQARLADA KRGARPEEIA QAEAQLDSAQ AEADLAQDRA KRYDKLQQEG AVSFDEYQGY LQEARSATAA VTEAERRLAQ LKKGRQSDIE AQSAQVEQAR QNLIRFQNGP RVEEIAQARA EVAEAQAQVQ MAQVELDKTR IKAPFDGVIG DIPVKIGDYV GEGDELTTIT ENNVLEVNLQ VPIQYKQNLR LGLPVEIFNT QNQVITRGKI SFIAPNVSSN SQLILVKATI PNVLGELLNL QFIQGRIIFD EKPGILVPTA AISRIGGETF VFVATQAPDS GNNKENAPTL IVKQRSVELG ELQGNSYQVL EGLEPGERIV TAGILNLQDG APIIPQP
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