Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1007 |
Symbol | |
ID | 7111594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 1114675 |
End bp | 1115301 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643479276 |
Product | transcriptional activator, TenA family |
Protein accession | YP_002376329 |
Protein GI | 218438000 |
COG category | [K] Transcription |
COG ID | [COG0819] Putative transcription activator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.00691349 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCTCTC AACAATTATG GAAAGATAAT TACTCTTTAG TACAAGCTTG TTTAAATCAT CCCTTTGTAC AAGGAATTGC TACAGGAAAT TTACCCCCTG AAAATTTTGC CTTTTACGTC GGACAAGATG CCTTTTTTTT AGAATCTTTT GCTCGTGCTT ATAGTATTGC TGCGGCAAAA ACTCCGGACT GGGAAGGGTT TTCTACCTTT CATCAATTGG GAAATGGAGT GTTAGAAGAA CTGCGTTTAC ATGAAACTTA TGCCCGTCAG TGGGGAGTCA ATTTAAAAAC TATTCAACCC GCACCGGCAA CCCGTCGTTA TACCGATTTT TTACTCGCTA CCGCCTGGAG TCAAGATGTC GGAGTGATTG CTGTCGCCAT GAGTCCCTGT ATGCGTCTAT ATGCCTTTCT AGGGCAACAA TTGGCTAAAA ATGACATTCC CCCCCATCAT CCCTATCGCA ACTGGATAGA AACCTATAGT AGCCCCCTGT TCGAGAATTT AGCCCAAGAA ATAGAAGCTT TGAGCGATCG CTATGCTAAT CTGACAGAAC CCGTTAAGTC AACTTATTCC TATGCCCTGT TCTGTGAACA AGAATTTTTT ACTTCTGCTT TAATAATTGA GAGTTAA
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Protein sequence | MLSQQLWKDN YSLVQACLNH PFVQGIATGN LPPENFAFYV GQDAFFLESF ARAYSIAAAK TPDWEGFSTF HQLGNGVLEE LRLHETYARQ WGVNLKTIQP APATRRYTDF LLATAWSQDV GVIAVAMSPC MRLYAFLGQQ LAKNDIPPHH PYRNWIETYS SPLFENLAQE IEALSDRYAN LTEPVKSTYS YALFCEQEFF TSALIIES
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