| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1005 |
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| Symbol | |
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| ID | 7111592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 1111684 |
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| End bp | 1113840 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643479274 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_002376327 |
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| Protein GI | 218437998 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.00579665 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGAAT TTGACAGGTC GATATCCTTT GACGGACGGG ATATCAGACT AAAATTGGGG
TTACTCGCCC CCCAAGCGGG TGGATCCGTC TTAATTCAAT CGGGAGATAC AGCAGTCTTA
GTCACGGCGA CTAAAGCAGC TAGCCGGGAA GGAGTAGATT TTCTTCCCCT GACTGTGGAT
TATGAAGAGA GACTTTATGC CGCCGGACGA ATTCCGGGAG GGTTTCTCAG ACGAGAAGGA
AGACCCCCCG AAAAAGCCAT TTTAATCAGT CGTCTGATTG ATCGGCCGTT ACGTCCTCTG
TTTCCCCATT GGTTACGGGA TGACATACAA GTCATTGCTA CCACTTTGTC AATGGATGAA
GAAGTCCCTC CCGATGTATT AGCGGTAACA GGGGCTTCTC TGGCAGTGAT TTTAGCAGAA
ATTCCCTTTT TTGGCCCAAT GGCAGCCGTT CGCGTCGGGT TAGTCGGAGA TGATTTCATC
ATTAATCCTA CCTATAAAGA AATTAATACC GGCGATCTTG ATCTCGTGGT AGCGGGGAGT
CCTGACGGGG TAGTGATGGT AGAAGCAGGA GCTAACCAAT TACCCGAACA AGATATCATT
GAAGCGATTG ATTTTGGGTA TGAAGCGGTA CGGGACTTAA TTGCAGCCCA ACAGGATGTG
ATGGAAACCT TGGGCGTGAA ATTGGCGACG TTAGACCCCC CGCCGGTCAA TGAGTCTGTA
CTTGAGTTTA TTAAGACTCA GACCGCCGAC GAAATCAAAA AAGTGTTGTC TCAGTACGAT
CTTGATAAAA ACGGTCGTGA TACAGCCTTA GATGAAATCA AAGCCGCCAA GGTAGAGGAG
GTTATTGCTT CTCTGCCAGA AGAAGACCCC ATTAAAGTCG CCACCACAGA AGAGGCGAAA
TTAGTGGACA CCCTTTTTAA GGATGTGACC AAAAAATTAA TGCGGTCTCA AATCATTAAT
GAAGGGGTTC GGGTTGATGG CCGTCAACTT GATCAAGTGC GTCCCATTAG CTGTCGTGTC
GGTCTTTTAC CCCCAAGAGT TCATGGAAGT GGGCTATTTT GTCGGGGACT GACTCAAGTG
TTGTCTATCG CCACTCTAGG AACTCCCGGA GATGCCCAAG AATTAGCCGA TGATCTCCAT
CCGGAAGATG AAAAGCGCTA TCTCCATCAT TATAATTTCC CTCCCTACTC TGTCGGAGAA
ACCCGTCCCA TGCGGTCTCC GGGTCGGCGG GAAATTGGAC ACGGGGCTTT AGCAGAACGG
GCTATCCTTC CTGTCTTACC GACTCAACAG GAATTTCCCT ATGTCGTCCG GGTCGTCTCT
GAAGTTCTCT CCTCCAATGG GTCAACTTCA ATGGGGTCAG TCTGTGGGTC AACCCTAGCC
TTAATGGATG CTGGTGTCCC CATTATTAAA CCGGTCAGTG GGGCAGCGAT GGGTTTAATT
AAAGACGGGG ATGAGGTTCG TATTCTGACG GATATTCAAG GCATTGAAGA CTTTTTAGGG
GATATGGACT TTAAAGTCGC CGGAACCGAT AACGGCATCA CCGCCCTGCA AATGGATATG
AAAATCACTG GGTTATCGAT GGATATTGTC GCTAAAGCCA TTGAACAAGC TAGACCCGCC
CGGTTACATA TCTTAGATAA AATGCTCAGT GTGATCGACT CCCCCCGTCC TGAACTGTCT
CCCTATGCCC CTCGTCTGTT AACCATGCGA ATTGATCCGG ATATGATCGG ATTAGTGATC
GGGCCAGGAG GGAAAACGGT TAAGAGTATT ACCGAACAAA CCAAAACCAA GATCGATATT
GATGATGATG GAACAGTCAC CATCTCTGCC TCTGAAGCAG AACAGGCAGA ACGGGCAAAA
CAATTAATCC ACAATATGAC CCGAAAACTC AATGAAGGAG AGGTCTATGT GGGTCGTGTG
ACTCGGATCA TTCAAATTGG CGCTTTTGTA GAAATTATGC CCGGCAAAGA GGGAATGATT
CATATTTCTC AACTCGCTGA AGGTCGAGTC GGTAAAGTTG AGGATGAGTT AGCCGTCGGC
GATGAAGTTG TGGTCAAAGT TCGAGAAATT GACAACAAAG GCCGTCTCAA TTTAACCCGT
CTCGGTATTC ATCCTGATGA AGCCGCCGCC GCCCGTAAAG CCGCAGCACT TTTATAG
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| Protein sequence | MEEFDRSISF DGRDIRLKLG LLAPQAGGSV LIQSGDTAVL VTATKAASRE GVDFLPLTVD
YEERLYAAGR IPGGFLRREG RPPEKAILIS RLIDRPLRPL FPHWLRDDIQ VIATTLSMDE
EVPPDVLAVT GASLAVILAE IPFFGPMAAV RVGLVGDDFI INPTYKEINT GDLDLVVAGS
PDGVVMVEAG ANQLPEQDII EAIDFGYEAV RDLIAAQQDV METLGVKLAT LDPPPVNESV
LEFIKTQTAD EIKKVLSQYD LDKNGRDTAL DEIKAAKVEE VIASLPEEDP IKVATTEEAK
LVDTLFKDVT KKLMRSQIIN EGVRVDGRQL DQVRPISCRV GLLPPRVHGS GLFCRGLTQV
LSIATLGTPG DAQELADDLH PEDEKRYLHH YNFPPYSVGE TRPMRSPGRR EIGHGALAER
AILPVLPTQQ EFPYVVRVVS EVLSSNGSTS MGSVCGSTLA LMDAGVPIIK PVSGAAMGLI
KDGDEVRILT DIQGIEDFLG DMDFKVAGTD NGITALQMDM KITGLSMDIV AKAIEQARPA
RLHILDKMLS VIDSPRPELS PYAPRLLTMR IDPDMIGLVI GPGGKTVKSI TEQTKTKIDI
DDDGTVTISA SEAEQAERAK QLIHNMTRKL NEGEVYVGRV TRIIQIGAFV EIMPGKEGMI
HISQLAEGRV GKVEDELAVG DEVVVKVREI DNKGRLNLTR LGIHPDEAAA ARKAAALL
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