| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0898 |
|---|
| Symbol | alaS |
|---|
| ID | 7111702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 997288 |
|---|
| End bp | 999933 |
|---|
| Gene Length | 2646 bp |
|---|
| Protein Length | 881 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643479167 |
|---|
| Product | alanyl-tRNA synthetase |
|---|
| Protein accession | YP_002376222 |
|---|
| Protein GI | 218437893 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0013] Alanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGACA CCCCTCAATA TCTTAGTGGA AGCGAGATCC GCTCTTATTT TCTAGATTTC
TTTGCTAAAA ACCAGCATCA AATTTTACCG AGTGCGTCCC TAGTCCCCGA AGATCCGACT
GTCCTGTTAA CCATCGCCGG AATGCTCCCA TTTAAACCGA TTTTTCTCGG ACAGCAAAAA
CCGGACTATC CTCGCGCGAC GACCTCCCAA AAGTGTATCC GCACTAATGA TATTGAGAAT
GTGGGACGAA CCGCCAGACA TCACACTTTT TTTGAGATGT TGGGTAACTT TAGTTTTGGG
GATTATTTTA AAGAACAGGC GATCAAATGG GCCTGGGAAT TGTCGACTAA AGTCTTTAAA
TTACCTCCAG ACCAAATTGT TGTCAGTGTT TTTGAAGAGG ATGACGAAGC TTTCGAGATC
TGGCGCGATA AAATTAATAT CCCTCCTCAA CGCATTAAAC GGATGGGGAA AAAAGATAAT
TTTTGGCAAG CTGGCCCGAC TGGCCCCTGT GGCCCCTGTT CAGAACTTTA CTATGATTTT
CATCCTGAAT TAGGGGATAA AACTATCGAT CTAGAAGATG ATTCCCGGTT CATCGAGTTT
TATAACCTGG TATTTATGCA GTATAACCAG GATGCAGAGG GAAATCTGAC CCCCCTACAA
AACAAAAATA TTGATACAGG AATGGGGTTA GAAAGAATGG CGCAAATTCT GCAAAAAGTC
CCCAACAATT ACGAAACCGA TCTCATTTTC CCCATCATTC AAGCGGCGGC TGATATTGCC
AAAATAGAGT ATAAAAAGGC GGATGAAAAA ACCAAAGTCT CTTTAAAAGT GATTGGGGAT
CATGTTCGCG CCGTTGTTCA CATGATCGCT GATGGGATCA CCGCTAGTAA TACCGGACGG
GGTTATGTTT TACGTCGTCT CATTCGTCGG GTTGTGCGTC ATGGTCGTTT AATTGGCATT
GAGGGAGCAT TTATTAATCA AGTCGCAGAA GTAGCGATCG CTCTTTCGGA AACCGCTTAT
CCTAATGTTA GACAACGAGA AACCCCCATC AAAGGAGAAC TTGATCGAGA AGAAGCGGCT
TTCTTAACCA CTTTAGAACG GGGTGAAAAA CTCCTCTCAG AAATCATTGC TAAAGTTAAA
AAAAGCAAGA AAAAACAAAT TTCCGGTGTC GATGCTTTTA AGCTTTATGA TACTTATGGG
TTTCCCTTGG AATTGACTCA AGAAATCGCT GAGGAAGAGG GGTTAACCGT CAATGTAGAA
GAGTTTGACG AGGAAATGAA AAAACAGCAA GACCAATCAA AAGCCGCCCA TGAAACGATA
GATTTAACGG TACAGGGAAG CTTAGATAAA CTTGCTGAAC ATATCCATCC CACCGAGTTT
TTAGGCTATA CTGATGCTCA ATCAGTGGCT CATGTTGAAG TGGTTTTAGT CGATGGAAAA
ACAGTAGACT CAGCAGAAGC TGGTACAGAG GTGCAAATTG TCCTCAACCA AACCCCCTTT
TATGCGGAGT CTGGGGGACA AATTGGAGAT AAGGGATATT TGACGGGTGA GACTTTAGTG
GTACGGGTTG AAGATGTCCA AAAAGAGTCC GCTTTCTTTG TCCATTTTGG ACGGGTTGAA
CGAGGGACTA TTACCGTAGG AGATAGTGTT ACAGCAACAA TCGATCGCGC TTGTCGTCGT
CGTGTTCAAG CCCATCATAC CGCAACTCAT TTACTCCAAG CGGCTTTAAA GAAAATTGTC
GATGATTCTG TGTCTCAGGC GGGATCTTTG GTGACTTTCG ATCGCTTACG GTTTGATTTT
AACTGTCCTC GTCCTGTCAC CCCCGAAGAA TTACAACAAA TCGAGGATTT AATCAATAAT
TGGATTGCAG AAGCCCACGA AGCCCACGTT TCTATTATGG CATTAGAGGA GGCTAAAGCT
AAAGGCGCTG TGGCTATGTT TGGGGAAAAA TATGGCGCAG AGGTGCGAGT TTTAGACGTT
CCTGGGGTGT CGATGGAGTT GTGTGGGGGA ACTCATGTCA GAAATACGGC GGAAATTGGA
CTGTTTAAGA TTATGTCTGA GAGTGGGGTT GCTGCGGGGA TACGTCGTAT AGAAGCGGTT
GCCGGCCCTG CGGTCTTGGA GTATCTTAAT GAACGAGAAG CGGTAGTTAA GGATTTATGC
GATCGCTTTA AGGTTAAACC TCATGAAATT AGCGATCGAA TTACAGCGTT ACAATCTGAA
TTAAAGTCAA CTCAAAAGCA AATGGAATCT CTACAACAAG AGTTAGCCAT TGCTAAGTCT
GATCAGTTAT TAAGTAATGC TGAATCTGTG GGAGATTTTA AAGTATTAGT TGCAGAAATA
GAAGGAGTTG ATCCCAATGG GTTAATGACG GCGGCAGAAA GATTACAGCA AAAATTAGGA
GAAAGTGCGG TTATTTTAGG CTCAATTCCC AGTGAAGGAA AGGTGAGTTT AGTGGCGGCT
TTTAGTCCTA AAGTTATTAA AGAGAAGAAG TTACAAGCCG GTAAATTTAT TGGAGAAATT
GCCAAAATTT GTGGCGGTGG AGGCGGTGGC CGTCCGAATT TAGCACAAGC AGGAGGCCGA
GATTCTAGTA AGTTAAAAGA GGCTTTAGAG TCTGCTAAGA AACAGTTAGC TGATAGTTTG
AAGTAA
|
|---|
| Protein sequence | MSDTPQYLSG SEIRSYFLDF FAKNQHQILP SASLVPEDPT VLLTIAGMLP FKPIFLGQQK
PDYPRATTSQ KCIRTNDIEN VGRTARHHTF FEMLGNFSFG DYFKEQAIKW AWELSTKVFK
LPPDQIVVSV FEEDDEAFEI WRDKINIPPQ RIKRMGKKDN FWQAGPTGPC GPCSELYYDF
HPELGDKTID LEDDSRFIEF YNLVFMQYNQ DAEGNLTPLQ NKNIDTGMGL ERMAQILQKV
PNNYETDLIF PIIQAAADIA KIEYKKADEK TKVSLKVIGD HVRAVVHMIA DGITASNTGR
GYVLRRLIRR VVRHGRLIGI EGAFINQVAE VAIALSETAY PNVRQRETPI KGELDREEAA
FLTTLERGEK LLSEIIAKVK KSKKKQISGV DAFKLYDTYG FPLELTQEIA EEEGLTVNVE
EFDEEMKKQQ DQSKAAHETI DLTVQGSLDK LAEHIHPTEF LGYTDAQSVA HVEVVLVDGK
TVDSAEAGTE VQIVLNQTPF YAESGGQIGD KGYLTGETLV VRVEDVQKES AFFVHFGRVE
RGTITVGDSV TATIDRACRR RVQAHHTATH LLQAALKKIV DDSVSQAGSL VTFDRLRFDF
NCPRPVTPEE LQQIEDLINN WIAEAHEAHV SIMALEEAKA KGAVAMFGEK YGAEVRVLDV
PGVSMELCGG THVRNTAEIG LFKIMSESGV AAGIRRIEAV AGPAVLEYLN EREAVVKDLC
DRFKVKPHEI SDRITALQSE LKSTQKQMES LQQELAIAKS DQLLSNAESV GDFKVLVAEI
EGVDPNGLMT AAERLQQKLG ESAVILGSIP SEGKVSLVAA FSPKVIKEKK LQAGKFIGEI
AKICGGGGGG RPNLAQAGGR DSSKLKEALE SAKKQLADSL K
|
|---|
| |