| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0711 |
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| Symbol | |
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| ID | 7110837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 784091 |
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| End bp | 785638 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643478979 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_002376035 |
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| Protein GI | 218437706 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.535917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTAA ATGATTGGTT GAGTTTAATT GTGTGTTGTT TTTGTCTAGG GTATTTAGTG
AGACTTATAT TCTCCTCTCC TAGACAAAAT ATAGGTTGGA TAATTGTTGG TAGTGCTATT
TTAGCCATTA CCCTTTTAAT GTTATATTTT ATGCCATCGG TAGCGGGGTT AATCGGTGTA
ATTCTCTGGG GAATTTTTAT TGTTATTCCT AGTTTAGGAT TTTTCAAGGT TAACACACTG
ATTTATCAAC AACAATATGG CAAAGCCAGT CAACTGACTG CTTGGTTATG CTGGTTACAT
CCGGTTGATG GATGGTTACA AAGAACGCAA ATTTTAAAAG CTTTAGATCT GGCTCAAAAA
GGAAATTTAA CCAAAGCTAT TCAAATCCTG CAACGCTATT CGAGATCTTC CTATCATTCT
CAAGTTTTAC TTTACTTAAT TAAGGCTGAT TGGAAAAACT GTCTGAGTTG GTTTAATCAA
TCTGTTCCTA AAGCTATATT ATTAAAAGAT CCGGTTTTAA TAAACTATTA TTTGCGCTGT
TTAGGAGAAA CGGGGAATTT AAATGAATTA CTTCAAGGGA TAGACTTTTT TAGAAGTTAT
TTAGAAAAAC ACGGGAATAA GATTGAGCAA AATTTATCAC GGATGTATGG GTTGGCTTTT
TGTGGTCAAA CGAGCCAAGT CCGAGAATTA TTTAAAGGAG TTTTATCGAT TTATTCCAAA
CAAACTGAGA GTTTTTGGAT TCTTACCTCT CAAATGGTAG CGGATAAAAA AGATACATCC
CGTCAGCACT TGTTAAATTT ACGAATGCGT CAAGATTTAA TTTTGAGTAA TGCGATCGAG
TGGCGTTTAT GTTATCCTCC GGTTGAGCCT AATTTAGTTT TAACCCAATC TTCTCGAACT
ATTCTATTCC GGTTAAAAAC AACCGTTAAT GGAGAAAATA CGTCGAAAAA AGTTACTAAA
TATACAGCCA AAAAACCGTA TATCACTATC TTTTTAATCC TCATAAATTT AATCTATTTT
GGACTAGAAA TTAAGCAAGG AGGCAGTGAA GATATCAATA TTTTATACAA TTTGGGCGGG
TTAGTTCCTG AAGAAGTAGA AAATGGTCAA TGGTGGCGAC TCATTACGGC TAATTTTCTT
CACTATGGTT GGTTACATCT TTCTATGAAT ATGATGGGAC TTTATTTTTT AGGTCATTTT
GTTGAATTGA CCCTAGGAAG ATTGCGTTAT TTAATCGCTT ATTTAGTCAG TGGAATAGGG
TCCATGTCTC TCTATACTCT ATTGTCTCTA AAATTGGAGG ATTCGGGACA AATTTTAGTG
GGTGCTTCGG CGGCAATTAT GGGATTAGTG GGGGTACTTT GTGCGGTGTT TCTGCGAGAT
TGGCTCAAAG AAAAGTCATC GATTACCGCC AGAAGATTAC AAATGATTTT AGTCGTGATT
GGCTTACAAT TTCTGTTTGA TTGGACTGTC CCCGAAATTA GTATTTTAAG TCATTTATTA
GGCTTAGGGT TAGGTTTTAT TGTCGGGGGG TTATTATTAA TTAAATAA
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| Protein sequence | MDLNDWLSLI VCCFCLGYLV RLIFSSPRQN IGWIIVGSAI LAITLLMLYF MPSVAGLIGV
ILWGIFIVIP SLGFFKVNTL IYQQQYGKAS QLTAWLCWLH PVDGWLQRTQ ILKALDLAQK
GNLTKAIQIL QRYSRSSYHS QVLLYLIKAD WKNCLSWFNQ SVPKAILLKD PVLINYYLRC
LGETGNLNEL LQGIDFFRSY LEKHGNKIEQ NLSRMYGLAF CGQTSQVREL FKGVLSIYSK
QTESFWILTS QMVADKKDTS RQHLLNLRMR QDLILSNAIE WRLCYPPVEP NLVLTQSSRT
ILFRLKTTVN GENTSKKVTK YTAKKPYITI FLILINLIYF GLEIKQGGSE DINILYNLGG
LVPEEVENGQ WWRLITANFL HYGWLHLSMN MMGLYFLGHF VELTLGRLRY LIAYLVSGIG
SMSLYTLLSL KLEDSGQILV GASAAIMGLV GVLCAVFLRD WLKEKSSITA RRLQMILVVI
GLQFLFDWTV PEISILSHLL GLGLGFIVGG LLLIK
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