Gene PCC7424_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0554 
Symbol 
ID7108660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand- 
Start bp609810 
End bp610421 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content45% 
IMG OID643478826 
Productpentapeptide repeat protein 
Protein accessionYP_002375885 
Protein GI218437556 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAATT TCTCAAACTT AGATTTAGTC GCAATTTGCC AAGGAAAAAT CAAAGATTTA 
TCTGATGTTA ATTTAGCGGG GGCTGATTTA GGGGGAGCTA ATTTAGCCGA AGTGAATTTA 
TCCGGAGCAA TTTTAACCGG AACTTGTTTG AGTGGTGCTA ATTTACAGGG AGCGGTCTTA 
CGAGCTAATT TAAAAGGAGC AGATCTGACC GGAGCCAATT TAAACGGGGC AGATTTACGC 
AATGCGGATT TACGGGGAGC GATTTTATTA GATGCACAAG TTGAGGACAT TAGCTTTGCT 
GGAGGGTTTC TTGCCGGAGC GACATTAAGT CATCTCGATT TGAGGGCGAC TGATTTTCGC 
GGGACAGACT TACGAGGAGC GAGTTTAGTG GGCAGCAATC TTGGGCAAGC GGATTTTAGT 
AGTGCTAATC TCTCAGGAGC AGATTTATCT CAAGCCGATT TAGAAGAAGC CATCTTAAGG 
GGGGCACTCC TGCGCGGAAC GAATTTTACA GGGGCAAATC TGCTTTGCGC TCAAGTTGAG 
GGAGCAATTT TAGATGGGGC TATCTTAGAC GGGGCTTGTC TGGAGGGAAC ACCTCTAAAA 
TTCCCCAGTT AG
 
Protein sequence
MGNFSNLDLV AICQGKIKDL SDVNLAGADL GGANLAEVNL SGAILTGTCL SGANLQGAVL 
RANLKGADLT GANLNGADLR NADLRGAILL DAQVEDISFA GGFLAGATLS HLDLRATDFR 
GTDLRGASLV GSNLGQADFS SANLSGADLS QADLEEAILR GALLRGTNFT GANLLCAQVE 
GAILDGAILD GACLEGTPLK FPS