Gene PCC7424_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0488 
Symbol 
ID7107433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp539257 
End bp540042 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content39% 
IMG OID643478760 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002375821 
Protein GI218437492 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCGA CTGTCTTAAT TACTGGCGCA TCTCAAGGAA TAGGCAAAGC AACCGCCTTA 
CTTTTAGCTA AAAAAGGCTA TAATCTGGCA CTGGCCGCGC GAAACTCTGA GCGTTTAGAA
GCTGTTACTC AAACCATAAA CAATCAAGGG GGAAAAGCCA TTGCAATTCC CACCGATGTG
ACTCATGCTC AACAGGTTGA AAGTTTAGTT AAAAAAGCCT TAGATCACTA TAAACAGATC
GATATTCTCA TCAATAATGC AGGAATTTGT ATGACTGCAC CGATGGAAGA AAGCACCTTA
GAAAATTGGC AACAGGTAAT GAATGTTAAT TTGTGGGGTT ATGTTTATAC TATTCAAGCC
TTATTACCTC ATTTCCTCGC CCAAAAACGA GGCATCATTA TTAATGTTGG CTCAATTGGG
GGAAAAATTC CCCTTCCGAA TATGACCGCT TATTGTACTA GCAAATATGC GGTAACTGGA
TTAACTGAAA CCCTTCGCTT AGAATTAGAA CCGAAAGGAA TACAAGTCTG TTGTGTTCAT
CCCAGTGTTA CTAATAGTGA TTTTCTAGAG CGGGCAATTT TTAATTCCGA TACTCGAAAA
AAACAGATGG AAGAAACCTT AAAAACTGCG ATCGCTAGTC AGCCGGAAGA TGTGGCTAAA
ACAATTGTAG AGGTAATAGA ACATCCTAAA CCAGAGGTAA TGGTTGGGTC TGGAGTAATG
TTAAATACTA TTTATAATTT TGTTCCTAGA TTATATGATT GGGTCGTGAA ACAATCTAGT
CAATAA
 
Protein sequence
MNSTVLITGA SQGIGKATAL LLAKKGYNLA LAARNSERLE AVTQTINNQG GKAIAIPTDV 
THAQQVESLV KKALDHYKQI DILINNAGIC MTAPMEESTL ENWQQVMNVN LWGYVYTIQA
LLPHFLAQKR GIIINVGSIG GKIPLPNMTA YCTSKYAVTG LTETLRLELE PKGIQVCCVH
PSVTNSDFLE RAIFNSDTRK KQMEETLKTA IASQPEDVAK TIVEVIEHPK PEVMVGSGVM
LNTIYNFVPR LYDWVVKQSS Q