Gene PCC7424_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0454 
Symbol 
ID7107399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp502723 
End bp503796 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content36% 
IMG OID643478727 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_002375788 
Protein GI218437459 
COG category[R] General function prediction only 
COG ID[COG4785] Lipoprotein NlpI, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTC CTCATATCAG TCTGGTTATG GCTTCCCCTT CCAACCATGC TAACCTAAGA 
CCAGAATTAT TAGTAGTAGC AAATAATAAA GCCTCCGAGA CAGAATTTTA TAATCAAGGA
GTCTCTTTAT TAAAACAAAA AAAATATCAG GAGGCACTCA AACAGTTTAA TCAAGCCTTA
AACATCAACC CGAATTATAC TCAGGCATAT ACTAAGCGGG GGTTAACCTA TTATCATTTA
AAACAGTATC AAGAGGCATT TAATGATTAT AATCGAGCGG TTCAGCTTGA TGCAAAATTT
CCCGAAGCTT ATACTTATCG AGGATTATTA CGTCATGCAC TGGGGAATGA TATTGGGGCA
TTAACTGATT ATAACCGAGC CATTGAAATT AAGTCTAATT ATGCCGAAGC TTATAATTAT
CGAGGGGTTT CTCATTTAGC CCTTTCCGAT CATCAAAATG CTATTAAAGA TTATACTCAA
GCGATCGCTC TTAATCCTAA ATATGCTGAA GCCTACAATA ATCGAGGGGT TGCTCACAGT
ATCGCTGGAG ATTATGCCAA AGCAATGGAA GATTATTCTA AGGCCATTCA ACTCGACTCT
AACTATACAC AAGCTTATAA AAATCGAGGA ATCACTAAGG CTCAATTAGG AGAATATTTA
GCCGCTATTA TTGATTATAA TCATGCTCTA GAATTAGATA GTCAAGACTC AAGTATTTAT
TACAATCGCG GAATTGCCTA TTATCAACTC AAAGAATATC AAAAAGCGAT CGCTGATTAT
TCTGAAGTGA TTAAACGCGA TCCTAACTCT CCTAATACTT ATTTTAGTCG GGCAGTGGCT
CGTCAACAAT TAAAAGATGC TCAAGGGGCA TTAGATGATT ATAATTTAGC GATTACTAAA
AAAACCGATT ATGCTGATGC TTACTTTAAT CGAGGGTTAC TGTTTTATCA AGTGGGAAAT
CAAAGCAAAT TTGTAGAAGA TTTAGAGAAA GCGGCTAGTC TTTATCAACA ACAGGGGAAT
AACCAAGGGT ATCAAAAAGT TCAAGATGTT TTGAGTAAAT ATGAACCGAT ATAA
 
Protein sequence
MTIPHISLVM ASPSNHANLR PELLVVANNK ASETEFYNQG VSLLKQKKYQ EALKQFNQAL 
NINPNYTQAY TKRGLTYYHL KQYQEAFNDY NRAVQLDAKF PEAYTYRGLL RHALGNDIGA
LTDYNRAIEI KSNYAEAYNY RGVSHLALSD HQNAIKDYTQ AIALNPKYAE AYNNRGVAHS
IAGDYAKAME DYSKAIQLDS NYTQAYKNRG ITKAQLGEYL AAIIDYNHAL ELDSQDSSIY
YNRGIAYYQL KEYQKAIADY SEVIKRDPNS PNTYFSRAVA RQQLKDAQGA LDDYNLAITK
KTDYADAYFN RGLLFYQVGN QSKFVEDLEK AASLYQQQGN NQGYQKVQDV LSKYEPI