Gene PCC7424_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0416 
Symbol 
ID7109273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp458589 
End bp460034 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content39% 
IMG OID643478689 
ProductTPR repeat-containing protein 
Protein accessionYP_002375750 
Protein GI218437421 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.80889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATA TAACTTATGA ATCTGTTGCT CAAGCCAATG AGGAAATCTA CGAAAAATTA 
TTAGTTTCTA TTGAGGCAGG TGTAGGAATG TTACAGATTT TTATTGCTGT GTGTGATACT
GACCGCCAAC GAGAGGCTAT TATTACTCGA TACGAACGAG ATTTAGCTCC TTCTATTAAT
ACTTATAGAG TTTTTCTTGA CCCTGAAGAA CCGACGCTAC GTCTAGCAGT TTCGCAGCAA
ATTACAGATA CTAAGAGAGA AAATGCTGTG GCTATGGTTA TGGGAACGCA AACATTAGGA
TTGAGAAAAA ATGATGAGTC TTTAAATAAG TTTTTTGGGT ATTTGCAGTG GACACGGGAA
GGGTTGCGAG AGCTAAAAAT GCCGATTGTT TTATGGATTC CTTCTCGGAT TTTAGTTCAA
CTTGCTAAGA AAGCTCCTGA TTTTTATAGC TGGCGAAATG GTGTTTTTCA ATTTCAGCCT
GAACCGTATG AAGAAACAGT TGAACCCCTA ACTACTCAAA GTATAGAGTT TGAAGGAAAT
AAGTCTAGTT CGATTTTTGA TGTAGAACAA TTAGAGTCTT CTTTGGCCAA AGCACTGGCT
ATGTGGGGAG AAAATAGCAG CAATCTTGAA CCTCTTTATA GTCAACTGGG TAATCTCTAC
GCCGATCGGG TACAATCAGG AGAATCCCCA GATAGAGAAC GAGAATTTAT ATTAGCACAA
GATTATTTGA ATAAGGCGAT CGCGCTACAA ACTCAATTTA AACAAGAAGA TGCTCTTGCT
CATACTCTCA GCACTTTAGC TTTACTCTAC AGATCTCAAG GCAGGTACAC TGAAGCCGAA
CCCCTTTTTT TACAAGCATT AGAACTGAGT AAACACATCT TAGGAAACAA CCATCTCGAT
GTAGCAACTT CTCTCAACAA TTTAGCTTTA CTCTACGATT CTCAAGGCAG ATACAGCGAA
GCCGAACTAC TTCATAAAAA AACATTAAAA CTTAGAAAAC ATCTTTTGGG AGACAACCAT
TTCGATGTGG CAACTTCTCT CAACAATTTA GCTTTACTAT ACAAATCTCA AGGCAGGTAC
GAAGAAGCCG AACCCCTTTT AAGACAGGCA TTAGAACTGT ATAAACGCCT TTTAGGAGAA
AACCATCCCA ATGTGGCAAC TTGCCTCAAC AATTTAGCAG CACTCTACGA TTCTCAAGGC
AAGTACGAAG AAGCCGAACC TTTTTTAATA CAAGCATTAG AATTGAGAAA ACGCCTTTTA
GGAGACAATC ATCCCGATGT AGCAATTTCC CTCAACAATT TAGCTTCTCT CTACTCTTCC
CAAGGCAGGT ACGCAGAAGC CGAACCCTTC TTTTTACAAG CATTGTTAAT ATTAGAAAAA
TCGTTAGGTG AACATCATCC CCATACACAA ACGGCTCGTA AGAATTTGCA AAGAATGCGG
CGATAG
 
Protein sequence
MNNITYESVA QANEEIYEKL LVSIEAGVGM LQIFIAVCDT DRQREAIITR YERDLAPSIN 
TYRVFLDPEE PTLRLAVSQQ ITDTKRENAV AMVMGTQTLG LRKNDESLNK FFGYLQWTRE
GLRELKMPIV LWIPSRILVQ LAKKAPDFYS WRNGVFQFQP EPYEETVEPL TTQSIEFEGN
KSSSIFDVEQ LESSLAKALA MWGENSSNLE PLYSQLGNLY ADRVQSGESP DREREFILAQ
DYLNKAIALQ TQFKQEDALA HTLSTLALLY RSQGRYTEAE PLFLQALELS KHILGNNHLD
VATSLNNLAL LYDSQGRYSE AELLHKKTLK LRKHLLGDNH FDVATSLNNL ALLYKSQGRY
EEAEPLLRQA LELYKRLLGE NHPNVATCLN NLAALYDSQG KYEEAEPFLI QALELRKRLL
GDNHPDVAIS LNNLASLYSS QGRYAEAEPF FLQALLILEK SLGEHHPHTQ TARKNLQRMR
R