Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_0345 |
Symbol | lysS |
ID | 7108963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 381699 |
End bp | 383420 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643478620 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_002375681 |
Protein GI | 218437352 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCTA ATCAATCCCA ACCCCAACCC CAATCCGGCT CTTCACTCGA AGAAATTCGC GCTACACGCC TTGAGAAAGT TGAACAACTC AAACAACTGG GATTGAATCC TTATGAGTAT AAATGGGAAT CAACCCACCA TGCAGCCGAA TTACAGGAAA AATACGCGGA TTTAGAAAAT GGCGAAGAAA TAGACTTAGA AGTATCGATC GCTGGTCGTA TTATAGCCCG TCGGGTGTTT GGTAAATTAG CCTTTTTTAA CCTCCAAGAT GAAACCGGAA CCATACAGTT ATATTTAGAG AAAAAGAGAA TTAGTCAAAC GATGGCAGAT GTTGCCAATG CCTTTAATAC TGTCCTCAAA TTAACCGATA CGGGGGATAT TTTAGGAGCA AAAGGAACAA TTAAACGGAC AGAAAAAGGG GAACTCTCCA TTTATGTGAC TGAGTATGCT ATTCTGACTA AAACTTTATT ACCCTTACCC GATAAATTTC ACGGATTAAC GGATATAGAA AAACGCTATC GTCAGCGTTA TGTAGATTTA ATTATTAATC CGGAAGTGCG AGAAACCTTT CGTCGTCGCG CCCAAATTAC GGCATCCATT CGTCGTTATT TAGAACAAGA AGGATTTTTA GAAATTGAAA CCCCAGTCTT ACAAAGTGAA GCCGGGGGGG CAGATGCTCG TCCTTTTATT ACCTATCACA ATACCTTAGA GATGGATTTA TATCTCCGCA TTGCCACCGA ATTACATTTA AAACGGTTAA TTGTGGGCGG GTTTGAAAAA GTCTTTGAGA TGGGCAGAAT TTTTAGGAAT GAAGGGGTTT CTACTCGTCA CAATCCCGAA TTTACCTCGA TCGAAATCTA TCAGGCTTAT GCAGATTATC ATGATATGAT GGTCTTAACG GAAAACATTA TCACCACAGC CGCTAAAGAT GTTGTCGGGA CTTTAAAGAT TACTTATCAA GAGGAAGAAA TAGATTTAAC ACCTCCTTGG CGACGGGTAA CTATGCACGA ATTAGTCGAG GAAAAAACCG GCTTAGATTT GAATAAATTT AAAACCTTTG AGGAAGCAAG AACCGCAGCG AAAAAAGCCG GGATAGACGT TCCTGAAGAC TGTAAAACTC TCGGAAAATT GCTCAATGAA GCCTTTGAAC AAAAAGTAGA AGAAAGTTTA ATTCAGCCCA CTTTTGTGTT AGATTTTCCC GTAGAAATTT CCCCCCTAGC TAAACCTCAT CGCTCTAAAT CTGGGTTAGT AGAACGATTT GAATTATATA TTGTCGGACG GGAATTAGCG AATAGTTTTT CTGAGTTAAC CGATCCGATC GATCAACGGA AAAGATTAGA AGCACAAGCA GAGAAAAAAG CAGCCGGAGA TTTAGAGGCG CATGGAGTTG ATGAAGATTT CTTAACCGCT TTAGAGTATG GAATGCCTCC TACCGGTGGG TTAGGAATAG GGATCGATCG CTTGATTATG TTGTTGACAA ATTCTCCGAG TATTCGAGAT GTGATTGCTT TCCCTTTACT GAAGAGTCAA AGTGCAGCGT TAAAAGGATT TGATTATGAT CCAGATAAAC AAATTTTGAG AATTGAGTTT ATTAATGGCA GTGTTTATAA GTATCTTGAT GTTCCTAAAT CTATTTATCA GGAATTAGAA AAAGCTCCCT CAAAAGGTCA GTTTTTTAAC GCTCAAATTC GAGATAAGTT TGGGTTCGAT CGGGAAATTT AA
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Protein sequence | MSSNQSQPQP QSGSSLEEIR ATRLEKVEQL KQLGLNPYEY KWESTHHAAE LQEKYADLEN GEEIDLEVSI AGRIIARRVF GKLAFFNLQD ETGTIQLYLE KKRISQTMAD VANAFNTVLK LTDTGDILGA KGTIKRTEKG ELSIYVTEYA ILTKTLLPLP DKFHGLTDIE KRYRQRYVDL IINPEVRETF RRRAQITASI RRYLEQEGFL EIETPVLQSE AGGADARPFI TYHNTLEMDL YLRIATELHL KRLIVGGFEK VFEMGRIFRN EGVSTRHNPE FTSIEIYQAY ADYHDMMVLT ENIITTAAKD VVGTLKITYQ EEEIDLTPPW RRVTMHELVE EKTGLDLNKF KTFEEARTAA KKAGIDVPED CKTLGKLLNE AFEQKVEESL IQPTFVLDFP VEISPLAKPH RSKSGLVERF ELYIVGRELA NSFSELTDPI DQRKRLEAQA EKKAAGDLEA HGVDEDFLTA LEYGMPPTGG LGIGIDRLIM LLTNSPSIRD VIAFPLLKSQ SAALKGFDYD PDKQILRIEF INGSVYKYLD VPKSIYQELE KAPSKGQFFN AQIRDKFGFD REI
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