Gene PCC7424_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0260 
Symbol 
ID7110504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp286250 
End bp286813 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content41% 
IMG OID643478535 
Productpilin polypeptide 
Protein accessionYP_002375596 
Protein GI218437267 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCTC TATTCAAAAT CAAACTCCTT AACCACTTAA ACAAAAAGAA TAACAAAGGT 
TTTACTTTAA TTGAACTATT AGTCGTTGTT ATTATTATCG GTGTATTAGC TGCCATTGCT
CTACCCAACT TATTAGGACA AGTGGCTAAA GGACGACAAT CTGAAGCGAG AAATAACCTC
GGTTCTATCA ACCGCGCTCA ACAAACTTTT CGTTTAGAAA GCTCTGATGC TACGTTTGCT
AAACTCGCTG ATTTACCCGT AAAAATAGGA AAAGAAACGG CTGCAGACAG TGGTGAATTT
GAAACACAAT ATTATATATT TAGCGACGGT GGGGACCCAA CTGCATTTGG GGCACAACAA
CAAGCAGTCG CTAAAACAGA GTATGGTAAT GACATTTTAG ATTACTCCTC TGCTGTGGGT
CAGCAGGCAG ATGGCACATT CTCTGCTGTT GTCTGCGAAC AAAGCACTAA TCCTAGTGAT
ACCTTTGACC CTGAAGCTGG TTCAACGCTA GGTGCTGAAG ATGCTGATGC TGAGTGTGCG
ACTGACACTA AACAAGTTAA GTAA
 
Protein sequence
MNSLFKIKLL NHLNKKNNKG FTLIELLVVV IIIGVLAAIA LPNLLGQVAK GRQSEARNNL 
GSINRAQQTF RLESSDATFA KLADLPVKIG KETAADSGEF ETQYYIFSDG GDPTAFGAQQ
QAVAKTEYGN DILDYSSAVG QQADGTFSAV VCEQSTNPSD TFDPEAGSTL GAEDADAECA
TDTKQVK