Gene PCC7424_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0246 
Symbol 
ID7110490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp273059 
End bp273841 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content35% 
IMG OID643478521 
Productpentapeptide repeat protein 
Protein accessionYP_002375582 
Protein GI218437253 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.161553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAACA AAGAACAATT TGAGCTTTTA ACTAAAAATG TAGCTCTTTG GAATCAATGG 
CGAAGCAAAC ATCCTTGGAT TATTCCCGAT CTTGAAGGGG CTAATCTCGC AGAAATTAAT
TTAAGTAATG CTAATCTATG TGAAGCTAAC TTAAATGAAG CGAAGTTAAA TGGGACTAAT
TTACACAAAG CCCTCTTAAG AAAAGCTAAT TTACATAAAG CGAAGTTAAA TGGAGCTAAT
TTAATTGAAA CTGATTTGAC TCAGGCGGAT TTATCTCAGG CGGTTTTAAC TGGTGCTAAT
TTGACTCAGG CTTATTTGTG TTTTGCTAAT CTTACTGAGG CAGATTTAGT CAATGCTAAT
TTAACAAGAG CTTATCTCTG TGAAAGTTGC TTAAATCAGG CTAAATTAGA CAATGCTAAC
CTTTTTCAAG CCGATCTTCA ACAAGCTAGG ATTATTAAAG CTCAGTTAAG TCAGGCAAAT
TTAGAACAAG CTAATCTCAC TCAAGCTATT ATTACTGATA TTATTGCTTT GGCGACTAAT
TTTAGAGGAG CTAAGTTGAG CAATTCTACT CTTTTAAATT GGGTAATCGA TCAAGAAACT
AAGTTAGACA ATAAGCTTCC CCATAATAGT CAAAACTTAT TATTATTCCC AAAACCCGAA
AAAACCCCCC AGACTTCGGG TTGGAGTCAT TCAGAAAAAG TCACTCCCCA ACCTGCTCAA
AATTCTCAGC ACTCAACTCA AGACCAGTTA AAAACCGCTA AATTAAAAAG TATTTTCGGT
TAG
 
Protein sequence
MANKEQFELL TKNVALWNQW RSKHPWIIPD LEGANLAEIN LSNANLCEAN LNEAKLNGTN 
LHKALLRKAN LHKAKLNGAN LIETDLTQAD LSQAVLTGAN LTQAYLCFAN LTEADLVNAN
LTRAYLCESC LNQAKLDNAN LFQADLQQAR IIKAQLSQAN LEQANLTQAI ITDIIALATN
FRGAKLSNST LLNWVIDQET KLDNKLPHNS QNLLLFPKPE KTPQTSGWSH SEKVTPQPAQ
NSQHSTQDQL KTAKLKSIFG