Gene PCC7424_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0178 
Symbol 
ID7110264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp195856 
End bp196824 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content37% 
IMG OID643478455 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_002375516 
Protein GI218437187 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.895619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAG TCTTAAATCA GATAGAACCC TTTAACCCTG AAGATTTCCT CATTTTAATC 
GTTGATGATA TTAGTAAAAA TTTACAACTG GTCGTAGAAA TTTTGGATGA AGTGGGTTAT 
GCAACGACGT TTGCTATCAG TGGAAAGCAA GCTTTAGAGC GGGTAAAAAT TGCTCATCCA 
GATTTAATTT TACTCGATTT AATGATGCCT GAAATGAATG GGTTACAAGT CTGTGAAAAG 
TTAAAATCCG ATGCAAATTA TGCAGAAATA CCGATTATTT TTCTGACGGC AAGCGATGAA 
CAAGAAGACC TATTACAAGC CTTTAAAATG GGAGCAGTCG ATTATGTTAC GAAACCGTTT 
AAGTCCGGCG AATTATTAGC ACGAGTTAAA ACTCATTTAG AATTAAAACG CACTAAAGAT 
GCTCTAAAAA TGGCTTATGC AGAACTGGAA AAATTGGCTA ATACTGATCC TTTAACTGGG 
GTGGCTAATC GTCGCGCTCT TCTCAATTTT GGAGAACAAG AATTTTATCG TGCCCAACGG 
TATCATTGTC CTTTTTCTCT TCTGATTATT GACCTGGATT ATTTTAAAAA AATTAATGAT 
TCTTACGGTC ATGATATAGG AGATCTGGCT TTGAAAACCG TGACTGAGGC GGTTAATAAA 
GCTATTCGTA AAATCGATCT TTTAGGGCGT TTTGGCGGTG AAGAGTTTGT TGTTATTTTA 
CCCGGCACAA AACTTAAAGA TGCTTGTATA GTAGCGCAAC GTATTTGTAG ACTTATCTCT 
GAGGTTTCTT TAAGCGTCGA ACAAAAAACC CTGAACATGA CGGCTAGTAT TGGAGTGGCG 
GCTTATAATA AAAAAGATAA AACTATTAAT GAAATTATTC ATCGAGCCGA CCAAGGACTA 
TATCAAGCCA AAAATCAGGG ACGTAATCAG GTTGTTGTAT ATGATATCGG CACTGTCGAA 
AATGGTTAA
 
Protein sequence
MDKVLNQIEP FNPEDFLILI VDDISKNLQL VVEILDEVGY ATTFAISGKQ ALERVKIAHP 
DLILLDLMMP EMNGLQVCEK LKSDANYAEI PIIFLTASDE QEDLLQAFKM GAVDYVTKPF 
KSGELLARVK THLELKRTKD ALKMAYAELE KLANTDPLTG VANRRALLNF GEQEFYRAQR 
YHCPFSLLII DLDYFKKIND SYGHDIGDLA LKTVTEAVNK AIRKIDLLGR FGGEEFVVIL 
PGTKLKDACI VAQRICRLIS EVSLSVEQKT LNMTASIGVA AYNKKDKTIN EIIHRADQGL 
YQAKNQGRNQ VVVYDIGTVE NG