Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_0085 |
Symbol | |
ID | 7107771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 98063 |
End bp | 98953 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643478361 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002375423 |
Protein GI | 218437094 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.0195711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAC AATTCTCAGA AGACAATTTT AGCAACAATA ATCAGAGTTT TAACTTATAT CCTCAGTTAC CATTGTTTTT CAATACTCAG GCTGATTGGA ATGAGATTAG CCTGGAATAT CATATTCAGC CCCCTGGAGA AACCCCGGAA TTTGTGCTGA GTCATCACAC TATTAGTATT AATGTTGGGC AAAATGTTCA AATAGAGCGG ATGATTGATG GACATTTGCA ATCAAAGGTA ATGTTTACAG GGGCTGTGAG TTTTTGCCCT ATGGCTTTGC CCCATGCAAT CCGTTGGGAT ACAAAAGCGG AGATTCTCTT ACTTAATTTG GAAGATCGTC TGCTGAGTGA CAATGCCTTA GAGTTGCTCA ATACAGATGA AATTGAAATA ATCCCCTATC ATGCCATTGA AGATCCTCTG ATTCAACAGA TGGGACTAGC TCTTAGGAGA GAATTTCAAT CTGGTCAAAG TGATAGTAAA CTTTATGCAC AAACAATGGC TAATGCCCTA GCCGTGCATT TATTGCGACA CTATTCAACC AGGGGCAATA AAGCCAGAAC CTATACCAAT AAACTCCCTC AACATCAATT AAAGTTGGTC AAAGACTATA TCAATGATAA TTTAGAGCGC TCATTATGCT TACATGAACT CGCAGGACTT ACTCAACTGA GTCCTTATCA CTTCTGTCGT GTGTTTAAGC AATCCATTGG GAAAAGTCCC TATCAATATG TGATTCAATG TCGGGTAGAA CGGGCAAAAC AATTATTGAA GCAAAGTAAG CTGAATCTGG CTGAAATTGC GATCGTTTGT GGGTTTGCTC ATCAAAGTCA TCTCTGTCGG CATTTCAAAC GACTGACAGG CGTAACCCCA AAAGCGTTTT TAAAATCATA G
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Protein sequence | MSKQFSEDNF SNNNQSFNLY PQLPLFFNTQ ADWNEISLEY HIQPPGETPE FVLSHHTISI NVGQNVQIER MIDGHLQSKV MFTGAVSFCP MALPHAIRWD TKAEILLLNL EDRLLSDNAL ELLNTDEIEI IPYHAIEDPL IQQMGLALRR EFQSGQSDSK LYAQTMANAL AVHLLRHYST RGNKARTYTN KLPQHQLKLV KDYINDNLER SLCLHELAGL TQLSPYHFCR VFKQSIGKSP YQYVIQCRVE RAKQLLKQSK LNLAEIAIVC GFAHQSHLCR HFKRLTGVTP KAFLKS
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