Gene PCC7424_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0084 
Symbol 
ID7107770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand- 
Start bp97305 
End bp97970 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content42% 
IMG OID643478360 
ProductHemolysin-type calcium-binding region 
Protein accessionYP_002375422 
Protein GI218437093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.0482149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTTA TATCAGGAAC ATCAGGCAAT AATAACTTAG TCGGAACGGC AAATGCTGAC 
ACAATGTTCG GTTACGATTT GGTTGTCCCT TCTCCTGATG GAAACGACAC CATCAACGGT 
TTAGGTGGCA ACGATACCAT TTATGGAGGG AATGGGGACG ACATAATCTT TGGCGGGTTT 
TCCTCCTTAG CGGGAAGCTC TGACTTTCTC TATGGAGGCA ATGGGAACGA TTCTTTAGTA 
GGAGGATCGG GTAGTGATAG CCTCTATGGA GGCAATGGTA ATGATACTTT AACTGGCGGT 
TCGGGTATTG ACAGAATGTT CGGCGGTGCT GGTGCAGATA TTTTTCGGTT TTCAAGCATT 
AGTGATAGTA ATACCGGTAT TGGTAACCGT GATGTAATAG AAGATTTTAC AGTAGGAATT 
GATCGCATTG ACCTATCCGC TATAGATGCT AATCTTGATG TGGCTGGTAA TCAGGCTTTT 
AGCTTTATTG GCACTAATGA TTTTAGTGGT GCTGGTGTAG GTCAAGTACG TTTTACTCAG 
GTCTTTGATA GTAATCCTCG TACTGTCATT GAAATAGATA GGGAGGGTGA CAATAATTTA 
ACTACGGATA TGCAAATAGC ACTCAGTGGG ATCGTCAACC TTAGTTCTAG TAGCTTCATT 
CTCTAA
 
Protein sequence
MALISGTSGN NNLVGTANAD TMFGYDLVVP SPDGNDTING LGGNDTIYGG NGDDIIFGGF 
SSLAGSSDFL YGGNGNDSLV GGSGSDSLYG GNGNDTLTGG SGIDRMFGGA GADIFRFSSI 
SDSNTGIGNR DVIEDFTVGI DRIDLSAIDA NLDVAGNQAF SFIGTNDFSG AGVGQVRFTQ 
VFDSNPRTVI EIDREGDNNL TTDMQIALSG IVNLSSSSFI L