Gene PCC7424_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0043 
Symbol 
ID7112241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp54071 
End bp54709 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content42% 
IMG OID643478322 
ProductRibonuclease H 
Protein accessionYP_002375384 
Protein GI218437055 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.618415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAGC TAATACTCCC TAGCTTTGAT GTGTTTCTCT TGCCAGAAGT TAAAGGCCAA 
GAGACCTTAA TTGCTGGTGT GGATGAAGTG GGAAGAGGGG CTTTATTTGG CCCTGTAGTG 
GCGGGGGCGG TTGTTGTGCC GGTTTCCGCT ATTGATCAAT TAACTCAATT AGGAGTTAAG 
GATAGTAAGC AACTTTCCCC TAAACGACGA GTCGAACTCG CTCAACAAAT TAAAGGGTTA 
GCAATCGATT CTCATGTTAG TTTTGCCACT GTGGGAGAAA TTGATCAAAT TAATATCTTA 
CAAGCATCTT TAAAAGCGAT GTATCGGGCA GTGGTTAAGC TTAAAATCAA TCCGGCTGTC 
TGTTTAGTGG ATGGGAGACA CCCTCTTCCT AATTTAGAGA TTCGACAAGA AAATATTATT 
AAAGGGGACG AGCGATCGCC AGTGATTGCG GCGGCTTCCA TTTTAGCTAA GGTGTGGCGT 
GATAATTTGA TTGTGCGGTT AGCTCAAAAA TATCCCCAGT ATGATTTAAT CGCCAATAAA 
GGCTATGGAA CGCTAAGACA TCGAGAAGCA CTGCTTAAAT ATGGTGCTTC TCCTCAACAT 
CGTTTGTCTT TTCGTCCTTG TTGTGTGTCA AAAAATTGA
 
Protein sequence
MTKLILPSFD VFLLPEVKGQ ETLIAGVDEV GRGALFGPVV AGAVVVPVSA IDQLTQLGVK 
DSKQLSPKRR VELAQQIKGL AIDSHVSFAT VGEIDQINIL QASLKAMYRA VVKLKINPAV 
CLVDGRHPLP NLEIRQENII KGDERSPVIA AASILAKVWR DNLIVRLAQK YPQYDLIANK 
GYGTLRHREA LLKYGASPQH RLSFRPCCVS KN