| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BbuZS7_0672 |
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| Symbol | secD |
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| ID | 7106718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Borrelia burgdorferi ZS7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011728 |
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| Strand | + |
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| Start bp | 686898 |
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| End bp | 688658 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 643478083 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_002375152 |
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| Protein GI | 218249449 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG GATCTAAGCT TATATTGATA TTGTTGGTGA CGTTTTTTGC ATGTCTTTTA
ATATTTCCGA CTTTAAAATG GTATTTTTTA ATGAGCGTTG AGGATAAAAA AATAAGCTCA
TATTCACAAG AGGCCTTAAG GGATTATTCA AAGAAAAAAG CCCTGAATGA TCTTGTTAAG
CTTAAGGAAC TGTATAATAA AGATCCCAAT AGCAGTATTC CAGCTAGTTT GTCTTATTTA
ATTCCAATAG CAAAAAATAA TTATAGGTCT TCAATGAAAA TTCCACCTAA TATTTTTACT
GCTAAAACCT TGCGTGAAGG ATTTTTGACT GATTCGGATA TGGGAGAAGT AAGCTTAGAG
ATTTATAGAT ATTATGAGAA CATAAAGAAG GGCAAAAGCA GAATAATACA TCTTGGGCTT
GATTTGTCTG GAGGGATGAG TGTTACCATT TCTCTTGATT ATTCAAGTGT TGAAAAAAAA
TTAGGTCGTT CTTTGACTTT TGCTGAGAGA GAGGATGCCA TTTATCGAAT AATGCAAATT
CTTAAAGATA GGGTAGATAG GTTCGGGCTT ACAGAGCCTA AAATTGTAAG AGAAGCCGGG
GGAAATAAAA TTTTCTTAGA TATTCCTGGA GAAAAAGATG AGAGTAGAGT AAGCACTCTT
TTGAGCGGTA AAGGCAATTT GACTTTTTAT GTGGTTGATG ATGAGTCTAC ATCTCTTTTG
CATAGAAAAA TATTAGAAGC GGGCTCTCTT TTTTCTATTC CTGAAATTCA GGCAAGTATG
AACCTTCCAG ATAGTAAACA AATTTTTCCT TGGTATGTTA AAGATTCTTA TGGTGTGGAT
GATGAGTCAT CAGTTCGTTA TTATGTAGTT GATGCAAGCC CTGAAAATTC ATTTGATGGT
GCTCACATTA AAGATGCTGG GGTTTCTAAC GATCCTAGAA CAGGCCGAGA TACTGTTGCT
TTTAGCCTTG ATGTTGATGG AAGTGAAAAA TTTTTTAAAT TTACTCAAAA AAATGTTGGA
AAGTCTTTGG CCGTTGTTAT GGAAGGTAAA ATTAAGTCTG TGGCAGGAAT TGGATATGCT
ATCACTGGGG GCAATGTTTC AATTCAAGGT GACTCTTTTG ATAAAAAAGA GGCTCAAGAT
CTTGCTTTAG TGTTTAAAAC TGCAGCTTTT CCAGTTGATA TTAAAATAGA TGATTTGAGA
ATAATAGGGC CTACTCTTGG TGCTAGGACT ATTGATCTTG GCATTAAAGC TTCTGTGCTT
GCTCTTTGTT TAGTTTTTTT GTTTATATGT GTTTATTATG GTTTGAGTGG TGTTGTAGCT
GGATTTTCAC TTGTTATTTA TAATGTATTT TTAATTTTAG CGATATTGTC GGCCTTTAAT
TTTACTTTAA CTTTAACAAG CATTGCAGGT CTTATTTTGA CAATGGGTAT GGCCGTTGAC
ATAAATATAG TTATTTATGA GAGAATTAAA GAAGAAATTA GAGAAGGCAG AAGATTTGAA
AATGCTTTTG AAGATGGTTT TAAAAAGGCA TTTTTATCAA TTATGGATGC AAATATAACA
ACATTTATTG CGGTGCTTTT TTTAACTCTT CTTGGGACAG GAGTTATTCA AGGTTTTGCT
TGGTCTCTTT CTGTTGGAAT TGTGGCATCC CTTTTTAGTA GTTTGATTTT TTCAAGATTT
ATTTTGGAAT TTATCATATC TGTTAGAAAA AGCAAATTTA TAAGTATATC TTGGAGTTCA
AAATATGCAA AGAGTAATTA A
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| Protein sequence | MKKGSKLILI LLVTFFACLL IFPTLKWYFL MSVEDKKISS YSQEALRDYS KKKALNDLVK
LKELYNKDPN SSIPASLSYL IPIAKNNYRS SMKIPPNIFT AKTLREGFLT DSDMGEVSLE
IYRYYENIKK GKSRIIHLGL DLSGGMSVTI SLDYSSVEKK LGRSLTFAER EDAIYRIMQI
LKDRVDRFGL TEPKIVREAG GNKIFLDIPG EKDESRVSTL LSGKGNLTFY VVDDESTSLL
HRKILEAGSL FSIPEIQASM NLPDSKQIFP WYVKDSYGVD DESSVRYYVV DASPENSFDG
AHIKDAGVSN DPRTGRDTVA FSLDVDGSEK FFKFTQKNVG KSLAVVMEGK IKSVAGIGYA
ITGGNVSIQG DSFDKKEAQD LALVFKTAAF PVDIKIDDLR IIGPTLGART IDLGIKASVL
ALCLVFLFIC VYYGLSGVVA GFSLVIYNVF LILAILSAFN FTLTLTSIAG LILTMGMAVD
INIVIYERIK EEIREGRRFE NAFEDGFKKA FLSIMDANIT TFIAVLFLTL LGTGVIQGFA
WSLSVGIVAS LFSSLIFSRF ILEFIISVRK SKFISISWSS KYAKSN
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