| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BbuZS7_0127 |
|---|
| Symbol | rpsA |
|---|
| ID | 7106339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Borrelia burgdorferi ZS7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011728 |
|---|
| Strand | - |
|---|
| Start bp | 122440 |
|---|
| End bp | 124095 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643477558 |
|---|
| Product | 30S ribosomal protein S1 |
|---|
| Protein accession | YP_002374655 |
|---|
| Protein GI | 218249762 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0539] Ribosomal protein S1 |
|---|
| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATC AAAAAGATTT ACAAGAAAAT TATTTGAAAG TACTTGAAAG AGTAGAACTT
GGAAGTCGTG TTTCTGGGGC AGTTGTTAAC ATTATGAAGG ATTATGTTCT AGTAGATATT
GGTTATAAAT CGGAAGGCTT TATTAAGATT GAAGAATTTG AAAACGTTCC CCAAGTTGGT
GATAGACTTG AAGCAATCGT TGTAAGAATA GGTGGAGAAT TAGGTCTTAT TTTAAGTGTT
GAAAAGCTTA ATTCTTTAAA TTTTCAAGAT AAAGTATATG AATATATTCA AAATAAAAAA
ATAATTAAAG GCAAGGTGCT GGTTGAGCTT CCAAATGGTT ATAAGATTCA AATTAATGAA
AATGTTTCTG GCTTTATGCC TTTTTATTTA AGCTCTAAAT CTAAGGATGA GAAATTAAAA
AGAGGGTCTG TTGTTGAATT TTATATTCTT GAAGCAAGCG AAGCAGACGG TTTGAGACTT
ATTCTTGATA GACGCACCCT AGAAAAAGAA AGAGATCTTG CTAAGAGAAT AGAGCTAGTT
AGTTCTTATA ATGAAGAAGA TGTAGTTGAT GGTGTGGTTG AGCGTATTAC AGAATATGGT
GCGATTGTAA AAATTAAAAA TTTTGTTACA GGAATTTTGC ATAAAAGAAA TATTGCCTTT
AATCAAGTTG AAAATGTTGA AGATTTTGTT AGAGTTGGTG ATAAGTTAAA GTTGAAAATT
ATTAAGATAA ATCCACAAAC AGGCAAAATG GAATTGTCTC TTAAGGCCTT AAAAGCAAAT
CCTTGGGATT CTGTAGATGT TAAATATAAA ATTGATAGCA TTGTAAAAGG GAAAGTTGTA
AAAATTTTAC CCTTTGGGGC TGTTATTGAA CTTGACAGCG AATTGTCGGG ATTTTTACAT
ATAAGTAATT TTTCTTGGAT AAGAGTAGTA AAAAGTCCTC AAGAATTAAT AAAACTTGGC
CAGATTGTAG AAGTTAAGAT TTTAGAGATA GATAAAGAAA ATCAAAAAAT ATCCCTAGGC
ATTAAACAGA TCAATGAGAA TCCTTGGGAG AGATTAACTG AGAAATATCC TATTGGAAGG
GTTGTTCAAG GAGTTGTTAC TAATATTACA AAAACAGGTG CTTTTGTAAA TATTGAAGAA
GGTATAGATG CTTATGTTAG TAAGTTTGAT ATTTCTTGGC TTGAAGAGAT TGATCCTGAA
GAATATTTCA AGATAGGCGA TTTAGTGAAT GGGAAAGTGC TTGAGGTTGA CAAGAGAAAG
AGAAATGTTA GATTAGGAAT TAAGCAGCTA GAAGAGAGCC CCTGGGAAGA TTTTTCTAAA
AGTTATAAAA AAGGCGATAC TATTGAGGTT GAGATTGTAG AGAAAAAATC AAAAGGCTTT
CAAGTAAGAG TTTATAATAA AATAATGGGA TTTATTAGTA AAATTCAATT GGGGGATACA
AAAGAATCTA GTTTAGAAAC TTTCGAAAAA TTAAACGTTG GAGATAAGCT TAAAGTGGTA
ATAACAAGTA TTGATTCTAA AGACAAATCA GTGCTGCTCT CTTATAGGGA GTATGAAAAT
CAAAGATCAA GAGAAGAAAT TTCTTCTTAT TTATTTAAGG GCAATGATGA GGAATCTTAC
AAGCCATTTG AGAATTTGCT AAAGAGGGAT GAATAA
|
|---|
| Protein sequence | MENQKDLQEN YLKVLERVEL GSRVSGAVVN IMKDYVLVDI GYKSEGFIKI EEFENVPQVG
DRLEAIVVRI GGELGLILSV EKLNSLNFQD KVYEYIQNKK IIKGKVLVEL PNGYKIQINE
NVSGFMPFYL SSKSKDEKLK RGSVVEFYIL EASEADGLRL ILDRRTLEKE RDLAKRIELV
SSYNEEDVVD GVVERITEYG AIVKIKNFVT GILHKRNIAF NQVENVEDFV RVGDKLKLKI
IKINPQTGKM ELSLKALKAN PWDSVDVKYK IDSIVKGKVV KILPFGAVIE LDSELSGFLH
ISNFSWIRVV KSPQELIKLG QIVEVKILEI DKENQKISLG IKQINENPWE RLTEKYPIGR
VVQGVVTNIT KTGAFVNIEE GIDAYVSKFD ISWLEEIDPE EYFKIGDLVN GKVLEVDKRK
RNVRLGIKQL EESPWEDFSK SYKKGDTIEV EIVEKKSKGF QVRVYNKIMG FISKIQLGDT
KESSLETFEK LNVGDKLKVV ITSIDSKDKS VLLSYREYEN QRSREEISSY LFKGNDEESY
KPFENLLKRD E
|
|---|
| |