| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_4295 |
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| Symbol | ispD |
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| ID | 7103836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8801 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011726 |
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| Strand | - |
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| Start bp | 4514769 |
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| End bp | 4515455 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643477275 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_002374374 |
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| Protein GI | 218249003 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATTTAT TAATTCCGGC TGCTGGACTA GGAAAACGCA TGGGAAGCGA TCGCAATAAA
CTACTCCTTA CAGTCTTAGA AAAACCCTTG TTAAGTTGGA CACTCCTGGC TGCGGAAGTA
TCCTCAGAAA TTCACTGGAT TGGTCTTATC GGTCAATCCT ATGATTTCCC TAACTTTAAA
ACCATTTTAT CCGATCTTTG TTTAACTAAA CCCGTTGAAT TAATTCAAGG GGGAAATACG
CGACAAGAAT CCGTTTACAA TGGGTTACAA GCGTTACCTC CAGACGCGGA ACGGGTATTA
ATTCATGATG GGGCTAGATG TTTAGCAACT CCAGAATTGT TTAATCGGTG TGCAAGGCAA
TTATTGACTT GTCAGGGGTT AATTGCTGCC ATTCCCGTGA AAGATACCAT TAAGGTTGTT
GACCATGATA ATATAGTTAA AAGCACTCCT GATCGCGCTC AATTATGGGC TGCCCAAACA
CCCCAAGGAT TCGAGGTTAA ACGGTTAAAA GAATGTCATG AAAAGGGACG TAGTTTAGGA
TGGGAAGTGA CTGACGATGC TGCTTTATTT GAAAAGTGTC AGTTACCCGT TAAAATTGTT
GAAGGCGAGG AAACCAATTT AAAAGTAACC ACCCCTATTG ATTTAACGTT AGCTGAATTT
ATTCTTAAAC AACGAATTAA TCAATAA
|
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| Protein sequence | MYLLIPAAGL GKRMGSDRNK LLLTVLEKPL LSWTLLAAEV SSEIHWIGLI GQSYDFPNFK
TILSDLCLTK PVELIQGGNT RQESVYNGLQ ALPPDAERVL IHDGARCLAT PELFNRCARQ
LLTCQGLIAA IPVKDTIKVV DHDNIVKSTP DRAQLWAAQT PQGFEVKRLK ECHEKGRSLG
WEVTDDAALF EKCQLPVKIV EGEETNLKVT TPIDLTLAEF ILKQRINQ
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