| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_4277 |
|---|
| Symbol | |
|---|
| ID | 7103821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | + |
|---|
| Start bp | 4493543 |
|---|
| End bp | 4495000 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643477257 |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_002374356 |
|---|
| Protein GI | 218248985 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTT CTTTCCAAAG CTTAGGACTC TCTGAAACCC GCGCCAACCA ATTAGAAGCG
ATCGGCTTTA CCAGTCCTAC TGAAATTCAA CAAAAAGCCA TTCCTTTACT TTTAGAAGGC
CATGATATTT TAGGTCAATC CCAAACAGGA ACGGGAAAAA CTGCAGCCTA TTCGTTACCT
ATTCTTGAAC AAGTTGATGT CAAAAATCCC AACGTACAAG CCCTTATTTT AACCCCCACC
CGCGAGTTAG CCCAACAAGT AGCCCTCGCC CTCAAAGATT TCTCCACTGA ACGCCGACTC
TACATCTTAA CGGTTTATGG TGGTCAATCC ATTGAAAGAC AAATCCGCAG TTTAGAACGG
GGTGTGCAAA TTGTTGTTGG AACCCCCGGA CGGGTTATCG ATCTATTAGA CCGCAAAAAA
CTCAGCTTCG AGGGCTTACG TTGGGCAGTC CTTGATGAAG CCGATGAAAT GCTGAGTATG
GGCTTTATCG ACGATGTGAA GAAGATCCTC AAACAAACCC CCGACACCCG TAGTACGGCT
TGTTTTTCTG CCACCATGCC CCGCGAAATT CGGGAATTGG TCAACCAGTT CCTCAAATCT
CCCGTTACCG TTGCAGTAGA ACAGCCCCAG GCAGCCCCAT CAAAAATTGA GCAGCATCTT
TATAACGTTC CCCGTGGTTG GTCAAAACTC AAAGCCCTAC AGCCTATTTT AGAACTTGAA
GCCCCCGAAT CAGCCATTAT TTTTGTCCGG ACAAAACAGA CGGCGGCGGA ATTAACCTGC
AAGTTACAAG AAGCCGGGCA GAGTGTGGAT GAATATCACG GCAATTTGAG TCAATCTCAA
CGGGAACGCC TAGTTTATCG CTTCCGTGAA GGCAAAATTA AGCTGGTGGT AGCAACGGAT
ATTGCAGCGC GGGGGTTAGA CGTGGAAAAT TTAAGCCACG TCATTAACTA CGACTTACCC
GATAATGCAG AAACCTATAT TCACCGCATT GGACGGACTG GACGCGCGGG TAAAACGGGA
ACGGCGATCT CTTTGGTGGA ACCGATTGAT CGTCGCATGA TCAAGCAAAT TGAACGTAAA
TTACGCCAGC AACTGGAAAT TTGTCAGATT CCTAGTCGTT CCCAAGTGGA GTCGAAGCGA
CTTGAAAAAT TACAACGCCA GATTCAAGAA TCCTTAGCCG GAGAACGGAT GGCTTCTTTC
TTGCCCATCG TCCGAGAATT GAGTGCGGAA TATGATCCTC AAGCGATCGC AGCCGCAGCC
CTTCAGATGG TTTACGATCA AGATTGTCCC AACTGGATGA AAACTGACTG GGAAGTGCCT
GAAGCAAGCG TACCCAAACC CGTTATTAAG CGCAAACCGT CTCCTAATAA TAATGGTGGT
AAATACAACC GTCGCAGTCA AGCTCCTCAA CGGTCTGGTG GTTCTGATCG CAAGGTAGTC
ACCCATAATC ACAATTAA
|
|---|
| Protein sequence | MTISFQSLGL SETRANQLEA IGFTSPTEIQ QKAIPLLLEG HDILGQSQTG TGKTAAYSLP
ILEQVDVKNP NVQALILTPT RELAQQVALA LKDFSTERRL YILTVYGGQS IERQIRSLER
GVQIVVGTPG RVIDLLDRKK LSFEGLRWAV LDEADEMLSM GFIDDVKKIL KQTPDTRSTA
CFSATMPREI RELVNQFLKS PVTVAVEQPQ AAPSKIEQHL YNVPRGWSKL KALQPILELE
APESAIIFVR TKQTAAELTC KLQEAGQSVD EYHGNLSQSQ RERLVYRFRE GKIKLVVATD
IAARGLDVEN LSHVINYDLP DNAETYIHRI GRTGRAGKTG TAISLVEPID RRMIKQIERK
LRQQLEICQI PSRSQVESKR LEKLQRQIQE SLAGERMASF LPIVRELSAE YDPQAIAAAA
LQMVYDQDCP NWMKTDWEVP EASVPKPVIK RKPSPNNNGG KYNRRSQAPQ RSGGSDRKVV
THNHN
|
|---|
| |