Gene PCC8801_4239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_4239 
Symbol 
ID7103792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp4449188 
End bp4450279 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content37% 
IMG OID643477220 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_002374319 
Protein GI218248948 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCGCC AAACAACCCT ACCCTGGTTA GTAAGTCTAT TCGTAATGGG TTTAACTTTA 
CCCGCGAATG CTCAACTTCA ACCTCTATTA ATTTTAGCGC AACAATCAAC TGACTCAGAG 
GAACTCAAAG AATTGTTGCG TTTAGGTCGA GAATATGTTG ATCTTAAAGA CTATAATAGC 
GCGATCGTAA CCTATGAGAA GGCAGCTATT CTTGATGGTA ATAATGCTAA AATTTTCTCA 
GGAATCGGTT ATTTGTACGC CCAAAAAGGG AACTTTAGAC AAGCCGTTAA GGCCTATCAA 
CAAGCCGTTA CTCTTGATCC TAATAATGCT GATTTTTATT ACGCTCTAGG GTTTAGTTTA 
GCGAATATAG GAGATAATGA AAATGCCGCT TCTGCTTATT ATTATGCGAT TCAACTTGCT 
CCACGAGTGA CGAAAAATTA TATTGGATTA GGGGTGGTTT TATTACGTCA AAATGATTAT 
CAAGGAGCAG CAGAAGCTTA TAAACGAGTG ATTGCCCTTG ATCCCAATAA TTCAGAAGCT 
TTTGCTATTA TGGGTTCTTC TTTGATTCAA CAAAAAGAAC TTGATAAAGC CATTCAATAT 
CTCAATAATG CGGTTAAAAG ATTTCCTAAT GATCTGGAGT TAAGATTATT ATTAGCAACG 
GCTTTTTTAG AACAAGATAA TAACGAACTC GCCTTTAATC AGTTAAAGAG TGCTGAAAGA 
ATTAGCCCGG GAAATCCTAA AGTTCAGTTG AAAATTGGCC GCATTTTAGA ACAACAAAAC 
AAGTTGGATG ACGCGCTTAA AACCTATCAA CGGATTACTT ATTTATCCCC TAGTTCAACG 
GAAGCGCGTG CGGGAGTTGG TAGAATACAA CTAGCTACTA AAGATTATCT AGGTGCAGTT 
ATCACTTATC GAGAATTAGC GTCAATGCTT CCTGAAACTC CTGAACCTTA CTATTATTTG 
GGATTAGCTT ATAAGGAGCG GGGACGAAAA AAAGAAGCGA CTAAAGCGTT AGAACAAGCA 
CGTCAATTGT ATCAAAAACA AGACAATAAT AAGGGCATTG AGGAAGTTGA TAAATTACTT 
AAACAATTGT AG
 
Protein sequence
MVRQTTLPWL VSLFVMGLTL PANAQLQPLL ILAQQSTDSE ELKELLRLGR EYVDLKDYNS 
AIVTYEKAAI LDGNNAKIFS GIGYLYAQKG NFRQAVKAYQ QAVTLDPNNA DFYYALGFSL 
ANIGDNENAA SAYYYAIQLA PRVTKNYIGL GVVLLRQNDY QGAAEAYKRV IALDPNNSEA 
FAIMGSSLIQ QKELDKAIQY LNNAVKRFPN DLELRLLLAT AFLEQDNNEL AFNQLKSAER 
ISPGNPKVQL KIGRILEQQN KLDDALKTYQ RITYLSPSST EARAGVGRIQ LATKDYLGAV 
ITYRELASML PETPEPYYYL GLAYKERGRK KEATKALEQA RQLYQKQDNN KGIEEVDKLL 
KQL