Gene PCC8801_4184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_4184 
Symbol 
ID7104582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp4388775 
End bp4390520 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content48% 
IMG OID643477171 
ProductCarbohydrate-selective porin OprB 
Protein accessionYP_002374270 
Protein GI218248899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAGAC TGTTAAACCA ACTGGTCAAA ATAACCCCAG GTCTTTTAGG CTGCCTATTT 
TTAGTAGCTC AAAGTGCGAT CGCTTCTCCT AAGACCGATT TTGAAACCGC TAACCCTGAG
ACAATCAACC CTGATGAGGC TTTAGGGGTT CTGCGAAACC GTCCTCAAAT GGACAATCCC
ATGAATCGGA CTTCTGGGCA AAAATTTAAT ACTTCCGCTT CCCAAGTCAC CAGCGTTTCC
GAGTTACGCG ACGTTCAACC CACCGAATGG GCTTATGAAG CTCTCCGTAG TCTCGTTGAA
CGCTATGGTT GTATCGTGGG ATATCCTGAC CGCACCTTCC GAGGCAACCG AGCCCTGAGT
CGTTGGGAAT TTGCAGCCGG GTTAAACGCT TGTTTAAACA CTATTGAACG GTTATTACAG
GAAAACGTCG CCGTTCTACG CGAAGATATC GAAAAACTCA AGCGACTTGC CCAAGAATTT
GAAGCAGAAC TCGCTGCGTT AGGGTCAAGG GTGAGTAACC TTGAAAGTCG AGTATCCTAT
CTCGAAGATC ACCAATTTTC CACCACCACC CAGTTAAAAG CCACTTCTAT CTTTACCTGG
TCTAATGCTT GGGGTGAACG AGCCCTAGAC TACCGCGAAC AAGATACCTA TAACCAGGCC
ATACAAAACA GAAGAAACAC AACAGCTAAA CGACGGCTTG ATGATAACTC CACCCTAGGT
TATCGGGTTC GTCTTAACTT CAATACCAGC TTTAGCGGGA AAGATATGCT GACGGCTCGT
CTTCAAGCGT TGACCATCGT TAACTATGCT AACCCCACAG GGACTAGTAT GGCACGGTTG
GGACACGATG CCAACAACGA CTCTAATGTT GTTATTGACA ACTTGTGGTA TCGCTTCCCC
ATTGGTCAGT TTACGGGGTA TGTGGGTGGT ACTGGTCTAG ACGTGGATGA TATCTTTGAT
ACAGGAAACC CCTACGGTAC CAGCTCCGAT ACAGGGGCTC TGTCGCGGTT CATGCGTTAC
GATCCCCTAA CCATGCGGGG GACTGAAGGG ATCGGTGCAG GTTTTGCCTA CAAATTCAAT
GATATGTTCA CCGTTCGAGG ACTTTACTTG ACTCCTGGTG GAGAAGGTAA TGATCCCTCT
CAAGGACGAG GTTTATTTAA CGGTAGCTTC ACGGCAGGGG GTCAAATTGG CTTTAAACCC
ACCGATGGCT TAACCTTTAA TGCCCAGTTC TTGCATAAGT ACTTCCGTCC TAATGGTGTC
AACGTTACCC ATGGTACCGG TTCGGGTATT GCGAGTGATC CTTTCTTGGG CGCAGCGACT
ATCACCGATA ACTATGGACT CAACGGTAAC TGGCGCATCA ACGAAACCTT TAACCTCACG
GGTTGGGTGG GTTATGCTTT AGCCCGTGGT CAAGGCCTCG ATAGTCGCGG CAGAAGTCGT
CGTGGTTTGG GAGCTGATAT CTGGTCTTGG ATGGTTGGAC TCAATGTCAT TGACTTATTC
AAAGAGGGAG CCGTCTTCTC CGTTGGGGGT GGTTCTATTA CCAATGCGCG TCGCGTTGAT
GCCCTCACGG GAGATTTGAC GGTTCCTGAC CAAGATACTC CCTACATCAT TGAAGGACAA
TATCGCTATC CTCTCAATAA AAACATTGAT ATTACCCCCG GTCTTTATGT CATCCTTGAA
CCCGATGGTA ATAATCAAAA CAACAGTATT TGGGTTGGCG TAGTTCGGAC TACTTTTAAG
TTCTAA
 
Protein sequence
MSRLLNQLVK ITPGLLGCLF LVAQSAIASP KTDFETANPE TINPDEALGV LRNRPQMDNP 
MNRTSGQKFN TSASQVTSVS ELRDVQPTEW AYEALRSLVE RYGCIVGYPD RTFRGNRALS
RWEFAAGLNA CLNTIERLLQ ENVAVLREDI EKLKRLAQEF EAELAALGSR VSNLESRVSY
LEDHQFSTTT QLKATSIFTW SNAWGERALD YREQDTYNQA IQNRRNTTAK RRLDDNSTLG
YRVRLNFNTS FSGKDMLTAR LQALTIVNYA NPTGTSMARL GHDANNDSNV VIDNLWYRFP
IGQFTGYVGG TGLDVDDIFD TGNPYGTSSD TGALSRFMRY DPLTMRGTEG IGAGFAYKFN
DMFTVRGLYL TPGGEGNDPS QGRGLFNGSF TAGGQIGFKP TDGLTFNAQF LHKYFRPNGV
NVTHGTGSGI ASDPFLGAAT ITDNYGLNGN WRINETFNLT GWVGYALARG QGLDSRGRSR
RGLGADIWSW MVGLNVIDLF KEGAVFSVGG GSITNARRVD ALTGDLTVPD QDTPYIIEGQ
YRYPLNKNID ITPGLYVILE PDGNNQNNSI WVGVVRTTFK F