Gene PCC8801_3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3979 
Symbol 
ID7103470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp4168032 
End bp4168547 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content43% 
IMG OID643476974 
Producthypothetical protein 
Protein accessionYP_002374074 
Protein GI218248703 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTAACAA AGGTGCGATA CACTTCAAGA TTGCTTTTGA TTGCCTATTG CTTGTTATTA 
AATGGCTGTA ATCATCCCTT ATTCATGACC CCCGAAATTC CCAGTGGGGG TCTTAATAGT 
CAATCTCCTG ATGAATATCC GGCCTATAGT GGGAATGGTC GCTATTTAGC CTTTGCTTCA 
GACCGCAATG GCCATCGAGA TATCTTTCTT TTTGATTTAC AACAACGGAG TTTGGTTCCC 
CTTCCTAATC TTAATCGCAG GGATTCCAGT CAAGATCAAC CGTCTTTAAG CGCAGATGGC 
CGTTATATTG CCTATGTCTC TACAGAACGG GGCAAAACGG ATATTATGGT TTATGATCGC 
CAACGTCAAC GCTCAGAACT GCTCACTGTT AATGTCAAAG GGACTGTTAA ACAACCGACG 
ATTAGTGGAG ATGGGCGAAA AGTGGCTTTT CAAACCAGTC AACTCGGTCA ATGGGATATT 
GCGATTATTA ACCGTAACAC TAACAGTCAA GAGTAA
 
Protein sequence
MLTKVRYTSR LLLIAYCLLL NGCNHPLFMT PEIPSGGLNS QSPDEYPAYS GNGRYLAFAS 
DRNGHRDIFL FDLQQRSLVP LPNLNRRDSS QDQPSLSADG RYIAYVSTER GKTDIMVYDR 
QRQRSELLTV NVKGTVKQPT ISGDGRKVAF QTSQLGQWDI AIINRNTNSQ E