| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_3528 |
|---|
| Symbol | |
|---|
| ID | 7102630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | + |
|---|
| Start bp | 3679590 |
|---|
| End bp | 3681038 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643476540 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002373649 |
|---|
| Protein GI | 218248278 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTTT CTAATCCTGA ACCCAAGCCA TCACCTCCAG AACCATCGGC TACCACTCCT
AACCACGACC TACCCTTATC TATGGATCGC AAACCTCCTG CTAAATTACC TATTCGTCAA
GGATTTGGTC CAGTTCTTCA AAATCGCCGT TTTTTGATCC TCTGGATCGG ACAAATTTTC
TCTCAATTGG CGGATAAAAT CTATCTGGTT TTAATGATTG CCTTAATCGC TGGACACTTT
CAAGGAAAAG ATCAGCCGAT TAGTGGTTGG GTATCAGCTA TTATGATTTC TTTTACGATC
CCTGCGGTGT TATTTGGTTC GTTAGCGGGG GTTTATGTAG ATCGTTGGCC GAAAAAAGGG
GTTTTAGTCA TCTCTAATTT GGTTCGAGGG GTATTGGTTT TGGTGATCCC GCCGCTAATT
TGGCTATCTC AGGATCAAAC CTTGGCTTTA CCGGTTCATT GGCTTCCCTT CTGGTTACGG
CAATGGCAAT CTCAAATTCA AGATAGTTTT TTTGTTCCTT TAGGATTTTT AATTATCTTT
ACTTTAAGCT TTATTGATTC TACGATTACC CAATTTTTTG CCCCGGCTGA ACAAGTCACG
ATTCCTTTAA TCGTCAAACG TCGTAATCTT CTATCGGCTA ATTCCCTATT TACCACAACC
ATGATGGCTA TGACTATTAT TGGTTTTGCT ATTGGGGAAC CTTTATTGGA ATTAGCGGCA
ACATTAGGGA AATTTATTGG ACTCTCTTGG GAAGAAGGCA AGTCTTCAGT GGTAGCTATC
TCCTATCTTC TAGCGGGTGT TATTTTAATG TTCTTAAAAA CGGGAGAAAA ACGCGAACAT
TATCAAAAGG ATCGTCCCCA TGTTTTAGAA GATATCCGCG ATGGCATTCG TTATTTAAAG
AACAATCATC GGGTTCGTAA TGCCTTAGTT CAATTGGTCA TTCTTTTTTC TATTTTTGCT
GCTTTGTCAG TATTAGCGGT CAGAATGGCA GAAACTCTTC CAGGGATGAA AGCAGAACAA
TTTGGCTTTT TATTGGCGAC TGCGGGTTTG GGAATGGCTT TAGGGGCAGG ACTTTTAGGC
AATTGGGGTC AACGTTTTCG TAATAATCAA TTAGGATTAT GGGGCTCGGT GGGAATGGCC
TTATCATTGA TCGCATTATC TTTATCAACC CATAGTCTTT GGTTAACTCT TTTGATGACG
GTTTTTTTAG GGTTATTTGG GGCTTTTGTT GGGGTTCCTA TGCAGACTAC CATTCAAGTT
GAAACCCCTA GAGATATGCA AGGTAAGGTC TTTGGATTAC AAAATAATGC CGTTAATATT
GCTTTGTCTT TGCCCCTTGC TTTAGCGGGT ATTGCAGAAA CTTTATTCGG GTTAAAACCG
GTTCTACTCT CCTTGTCAGT CTTAGCTATT ATTGGGGGAA TGTTAACTCG ATATATGGGG
GAAGATTAG
|
|---|
| Protein sequence | MSVSNPEPKP SPPEPSATTP NHDLPLSMDR KPPAKLPIRQ GFGPVLQNRR FLILWIGQIF
SQLADKIYLV LMIALIAGHF QGKDQPISGW VSAIMISFTI PAVLFGSLAG VYVDRWPKKG
VLVISNLVRG VLVLVIPPLI WLSQDQTLAL PVHWLPFWLR QWQSQIQDSF FVPLGFLIIF
TLSFIDSTIT QFFAPAEQVT IPLIVKRRNL LSANSLFTTT MMAMTIIGFA IGEPLLELAA
TLGKFIGLSW EEGKSSVVAI SYLLAGVILM FLKTGEKREH YQKDRPHVLE DIRDGIRYLK
NNHRVRNALV QLVILFSIFA ALSVLAVRMA ETLPGMKAEQ FGFLLATAGL GMALGAGLLG
NWGQRFRNNQ LGLWGSVGMA LSLIALSLST HSLWLTLLMT VFLGLFGAFV GVPMQTTIQV
ETPRDMQGKV FGLQNNAVNI ALSLPLALAG IAETLFGLKP VLLSLSVLAI IGGMLTRYMG
ED
|
|---|
| |