Gene PCC8801_3072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3072 
Symbol 
ID7102388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp3214679 
End bp3215674 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content46% 
IMG OID643476096 
Product30S ribosomal protein S1 
Protein accessionYP_002373209 
Protein GI218247838 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAACTC AGAAAACAAC AACTACTCAA ACTATTGGCT TCACCCACGA GGATTTTGCG 
GCACTTCTCG ACAAGTACGA TTACCATTTC AATCCGGGGG ATATTGTCCC CGGAACGGTT 
TTCAGTATGG AACCGAGGGG CGCGCTGATT GATATCGGTG CAAAAACGGC TGCCTACATT 
CCCATTCAAG AAATGTCAAT CAACCGAGTT GACAACCCCG AAGAAGTGCT TCAATCTAAT 
GAAACACGGG AATTTTTCAT TCTCACCGAC GAAAACGAAG ACGGACAACT GACCCTCTCC 
ATTCGTCGCA TTGAGTATAT GCGAGCTTGG GAACGAGTTC GTCAACTTCA AGCCGAAGAT 
GCCACCGTAC GGTCTAATGT TTTCGCCACC AACCGAGGGG GAGCTTTAGT TCGTATTGAA 
GGGTTGCGAG GTTTTATCCC AGGATCTCAC ATTAGTACCC GCGAAGCTAA AGAAGATTTA 
GTTGGAGAAG AACTGCCGTT AAAATTTCTC GAAGTTGATG AAGAACGGAA CCGTCTAGTC 
CTCAGTCATC GCCGTGCGCT GGTTGAACGC AAGATGAATG GCTTAGAGGT GGGTCAAGTA 
GTCGTTGGCT CAGTTCGCGG CATCAAACCC TATGGAGCGT TTATCGACAT TGGGGGAGTC 
AGTGGACTGC TGCATATTTC TGAAATTTCC CATGACCATA TTGATACCCC CCACAGTGTC 
TTTAATGTTA ATGATGCCCT CAAGGTCATG ATCATTGATC TTGATGCAGA AAGAGGTAGA 
ATTTCTCTGT CAACTAAACA ACTCGAACCT GAACCGGGTG ATATGCTTAA AAATCGAGAT 
TTAGTGTTTG AGAAAGCCGA AGAAATGGCG GAGAAATATC GTCAGAAACT CCGGGCTGAA 
GCGGAAGGAA AAGCCGCTCC TGAGGAGGAG GAATTAGAGA TTCCTTCAGC GTTAGAATCA 
GAAGATGAAG ACTTAGTGGT TAGTGCTGCT GATTAG
 
Protein sequence
MVTQKTTTTQ TIGFTHEDFA ALLDKYDYHF NPGDIVPGTV FSMEPRGALI DIGAKTAAYI 
PIQEMSINRV DNPEEVLQSN ETREFFILTD ENEDGQLTLS IRRIEYMRAW ERVRQLQAED 
ATVRSNVFAT NRGGALVRIE GLRGFIPGSH ISTREAKEDL VGEELPLKFL EVDEERNRLV 
LSHRRALVER KMNGLEVGQV VVGSVRGIKP YGAFIDIGGV SGLLHISEIS HDHIDTPHSV 
FNVNDALKVM IIDLDAERGR ISLSTKQLEP EPGDMLKNRD LVFEKAEEMA EKYRQKLRAE 
AEGKAAPEEE ELEIPSALES EDEDLVVSAA D