| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_3069 |
|---|
| Symbol | |
|---|
| ID | 7104545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | + |
|---|
| Start bp | 3211838 |
|---|
| End bp | 3213364 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643476093 |
|---|
| Product | photosystem II chlorophyll-binding protein CP47 |
|---|
| Protein accession | YP_002373206 |
|---|
| Protein GI | 218247835 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03039] photosystem II chlorophyll-binding protein CP47 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACTAC CTTGGTATCG AGTTCACACA GTTGTCCTGA ATGATCCAGG CCGACTTATT
TCCGTTCACC TCATGCACAC CGCCCTTGTT GCGGGTTGGG CAGGTTCCAT GGCTCTGTAC
GAGCTAGCTA TTTTTGATCC GAGTGATCCC GTTCTCAACC CCATGTGGCG ACAAGGGATG
TTCGTCCTTC CCTTCATGGC CCGCTTAGGA GTCACTGGCT CCTGGGGTGG CTGGAGTGTC
ACCGGAGAAA CAGGTGTAAA CCCTGGTTTC TGGTCCTTTG AAGGCGTTGC TGCCGCCCAC
ATCGTTCTCT CTGGGTTACT CTTCCTAGCT GCCGTTTGGC ACTGGGTTTT CTGGGATCTC
GAACTCTTTG TTGATGCCCG TACTGGCGAA CCCGCCCTCG ACTTACCTAA GATGTTCGGG
ATTCACCTGT TCTTATCTGG GTTACTCTGC TTCGGTTTCG GAGCCTTCCA CCTCACCGGA
CTCTGGGGAC CGGGGATGTG GGTATCTGAC CCCTACGGCT TAACCGGCCA TGTCCAACCC
GTTGCCCCAG AATGGGGTCC GGCCGGGTTT AACCCCTTCA ACCCAGGGGG AGTTGTGGCT
CACCACATTG CAGCCGGAAT TGTGGGCATT ATTGCGGGTC TATTCCACCT AACGGTACGA
CCCCCCGAAC GGCTCTATAA AGCCCTCAGA ATGGGGAATA TTGAAACCGT TCTCTCTAGC
AGTATTGCCG CCGTCTTCTT TGCGGCCTTT GTCGTTGCTG GAACGATGTG GTACGGTAAC
GCAACCACCC CCATTGAACT GTTCGGACCG ACCCGTTATC AATGGGATAA TGGCTACTTC
AAACAAGAAA TTGAACGTCG TGTTGAAGCC AATGTAGCGG CGGGCGATAC TTTAGGGGAA
GCTTGGTCTA AAATTCCCGA AAAACTTGCC TTTTACGACT ATGTTGGCAA CAGCCCCGCA
AAAGGCGGTT TATTCCGTAC CGGAGCCATG GATAGTGGCG ATGGTATCGC CCAAGCTTGG
TTAGGTCATC CTGTCTTTAC GGACAAAGAC GGTCGGGAGT TAACCGTACG TCGGATGCCT
AACTTCTTTG AAACTTTCCC CATCGTTCTA ACCGATGCTG ATGGAGTCGT CCGTGCTGAC
ATTCCCTTCC GTCGGGCAGA ATCTAAACTG AGTATTGAGC AAAGCGGTGT TACCGTTAGC
TTCTATGGTG GTGCGCTTGA TGGCCAAAGC TTCAGCAACC CCGCTCAGGT TAAACAGTTT
GCTCGTCAAG CCCAATTAGG CGAACCCTTC GAGTTTGACC GCGAAACCCT CGGTTCTGAT
GGGGTATTCC GTACCAGTCC TCGCGGTTGG TTTACCTTCG GACACGCCGT CTTCGCCCTA
CTGTTCTTCT TTGGTCATAT TTGGCATGGT TCTCGTACCC TGTACCGAGA TGTCTTCGCT
GGAATTGACC CCGACCTAGA GGAACAAGTG GAATTTGGCT TGTTTGCTAA GGTGGGTGAC
TTGAGTACCC GTCGTACCGA GTCTTAA
|
|---|
| Protein sequence | MGLPWYRVHT VVLNDPGRLI SVHLMHTALV AGWAGSMALY ELAIFDPSDP VLNPMWRQGM
FVLPFMARLG VTGSWGGWSV TGETGVNPGF WSFEGVAAAH IVLSGLLFLA AVWHWVFWDL
ELFVDARTGE PALDLPKMFG IHLFLSGLLC FGFGAFHLTG LWGPGMWVSD PYGLTGHVQP
VAPEWGPAGF NPFNPGGVVA HHIAAGIVGI IAGLFHLTVR PPERLYKALR MGNIETVLSS
SIAAVFFAAF VVAGTMWYGN ATTPIELFGP TRYQWDNGYF KQEIERRVEA NVAAGDTLGE
AWSKIPEKLA FYDYVGNSPA KGGLFRTGAM DSGDGIAQAW LGHPVFTDKD GRELTVRRMP
NFFETFPIVL TDADGVVRAD IPFRRAESKL SIEQSGVTVS FYGGALDGQS FSNPAQVKQF
ARQAQLGEPF EFDRETLGSD GVFRTSPRGW FTFGHAVFAL LFFFGHIWHG SRTLYRDVFA
GIDPDLEEQV EFGLFAKVGD LSTRRTES
|
|---|
| |