Gene PCC8801_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3000 
Symbol 
ID7105980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp3107234 
End bp3107827 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content44% 
IMG OID643476029 
ProductTripartite ATP-independent periplasmic transporter DctQ component 
Protein accessionYP_002373143 
Protein GI218247772 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTACTT TATTCAAATT TGCCCAAACT ATCGATTATC TGACGGAACA GGTAGGACGC 
TTGCTTTACT CGATTGTCAT CTTAACGGTC GGGATAGGAT TTTACAATGT AGCGGCTCGC 
TATCTAGGGC GGTTTGTTGG TCTAAAACTT TCCTCCAATG CCCTGATTGA ACTACAGTGG 
TATTTATTTT CCTTGATGTT CTTTATCGGG TTTCCCTACA TTTTGAAACA CAGTGCTAAT 
GTGCGGGTAG ATTTCCTCTA TGCTCACTGG AGTCCCAAAC GGCAAGCCTT AATCGATTTT 
CTGGGAACGG TCTTATTTTT GATTCCTTTC TGTCTGATAG GGATCTATGT CACTTTTAAC 
CCGGTTTTAC AGTCTTGGGG ACAGTTACCT GATGGGAGTT GGGGAGCTTG GGAGGTCTCT 
TCCGATGCCG ATGGGTTGCC TAGAGCCCCG ATTAAAAGTA TGATTCTTGT CTCTTTTGCG 
CTGTTGTTAC TTCAAGCAAT TTCCCAAGCG ATTAAGTATG GGGCTATCTT GCAAGGTTAT 
GAACCTGCAC TGCGAGAAAT TCAGTCAGAA ACCGAAAAAC CCCCGATTGA ATAG
 
Protein sequence
MPTLFKFAQT IDYLTEQVGR LLYSIVILTV GIGFYNVAAR YLGRFVGLKL SSNALIELQW 
YLFSLMFFIG FPYILKHSAN VRVDFLYAHW SPKRQALIDF LGTVLFLIPF CLIGIYVTFN 
PVLQSWGQLP DGSWGAWEVS SDADGLPRAP IKSMILVSFA LLLLQAISQA IKYGAILQGY 
EPALREIQSE TEKPPIE