| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_2843 |
|---|
| Symbol | |
|---|
| ID | 7105413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | + |
|---|
| Start bp | 2932000 |
|---|
| End bp | 2933490 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643475879 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_002372998 |
|---|
| Protein GI | 218247627 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCCT CAGAAAAATC TCAATCCAAT CAATTACCGT CAAAACCGAG AAATCGGCTC
GTCATTCTCG GCTTATTTCT CTTAGTAGCC GGATCAGGAC TGGGGATAAC TTGGTGGCTG
ACCAGTCGAA CCAATCAAAG CAATCCAGGG GCTTTAGCCC AGAAAATGCC CCCTACGCCC
GTTAAACTGA TGACCCTCAA GACCGGAACT ATCGAAGACA CCTCGGAAGT GGTAGGAACC
ATCGAGGCAA GAGATACCGT GGTGATCAAA CCTGAAATTG AAGGGCGTAT CAGTCAAATT
TTAGTCAAAG AAGGCGATCG TGTTCAACAG GGACAAGTTA TTATCACCCT CGATAATAGC
GATTGGCAAG CGGAATTACT GGCAGCCAAA GCCAGATTAG CCAGTACCGA GGCCAGACTC
GCTGAACTCC AAGCCGGAAA CCGCGCAGAA GATATCGCCG AAGCCAGAGC GAGTTTGCGA
GAAGCCCAAG CCCGTTTAGC TAACGCCCAA GGAGGGGCTA GACCTGAAGA AATTGCCCAA
GCAGAAGCTC AATTGCGCTC AGCCCAAGCA GAAGCCGAAT TAGCCCAACA ACGGGTTAAA
CGCTATGACC GACTCCAAGC AGAAGGGGCA ATTTCTGCTG ACCAGTACCA GGAATATACC
ACAGAAGCAC GGAGTAGCCA AGCAGCCGTA GAGCAAGCTC AACGTCGCTT GTCCCAATTA
ACCAAAAATC GTCGTTCTGA TATCGATGAA TTGGCAGCAG CCGTTGAACG GGAACGACAA
AATTTACAAC GTCTAGAAAC GGGTCCCCGT TCGGAAGTCA TTGCTCAGGC AAGGGCTGAA
GTTGCCCAAG CAACGGCACA AGTCCGCATG GCTGAGGTTA AGTTGAGTAA AACCCAAATT
GCTGCCCCTA TTTCTGGGAT TGTTGGGGAT ATTCCGGCTG AAGTCGGTGA TTATGTTGAA
CAAGGGAATA ACTTAACGAC GTTGACGGAA AATAACGTTT TAGAGCTTAA TCTGTCGATT
CCTCTAGAAA AAGCTCCCCA ACTCCGTCTC GGTTTACCAG TAGAGATTTT AGATGTTTCT
GGACAAGCGA TCGCTACAGG GAAAATTAGC TTTATTTCCC CCAATGTGAC TTCTGACTCC
CAATTAGTGG TGGCTAAGGC GACTTTTGTT AATCTGGAGA GAAGTTTATT AAACCGTCAA
TTTATCCAAG CTAAAGTCAT TTGGGAGCAA CGTCCAGGGA TATTAATTCC AGCTACAGCA
GTTTCTCGTC TAGGGGCAAC TACCTTTGTT TTTGTGGCTG AACCTGATAA GGCTGCTCAA
ACGGATAAGC CTCAATGGAT AACCAAACAA CGACAAATTA CCCTAGGCAA TTTACAAGGC
AATAACTATC AAGTGATAGA CGGGTTAAAA GCAGGAGAAA ATATCGTCAG TGCGGGCATT
CTTAAACTAA GCGATGGAGC TCCTATTCAA CCGATGGACA ATAAACAATA G
|
|---|
| Protein sequence | MESSEKSQSN QLPSKPRNRL VILGLFLLVA GSGLGITWWL TSRTNQSNPG ALAQKMPPTP
VKLMTLKTGT IEDTSEVVGT IEARDTVVIK PEIEGRISQI LVKEGDRVQQ GQVIITLDNS
DWQAELLAAK ARLASTEARL AELQAGNRAE DIAEARASLR EAQARLANAQ GGARPEEIAQ
AEAQLRSAQA EAELAQQRVK RYDRLQAEGA ISADQYQEYT TEARSSQAAV EQAQRRLSQL
TKNRRSDIDE LAAAVERERQ NLQRLETGPR SEVIAQARAE VAQATAQVRM AEVKLSKTQI
AAPISGIVGD IPAEVGDYVE QGNNLTTLTE NNVLELNLSI PLEKAPQLRL GLPVEILDVS
GQAIATGKIS FISPNVTSDS QLVVAKATFV NLERSLLNRQ FIQAKVIWEQ RPGILIPATA
VSRLGATTFV FVAEPDKAAQ TDKPQWITKQ RQITLGNLQG NNYQVIDGLK AGENIVSAGI
LKLSDGAPIQ PMDNKQ
|
|---|
| |