Gene PCC8801_2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_2472 
Symbol 
ID7104950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand- 
Start bp2557364 
End bp2557957 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content41% 
IMG OID643475514 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_002372637 
Protein GI218247266 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTT TTGAGGGAAC CTTTACTCAA GACCCATCCT TATTGCGTTT TGCGATCGTT 
ATTGGTCGTT TTAACGACTT AGTGACCGGA AAACTGCTAT CAGGTTGTCA AGACTGTTTA 
AAACGTCATG GGATTAATAT TGACCCAAAT GGTACTCAAG TCGATTATGC TTGGGTTCCA 
GGGAGTTTTG AGGTTCCCTT AGTCGCCCGT CAATTAGCCC TCTCAGGGCG TTATAATGCC 
ATTATCTGCT TAGGTGCGGT AATTCGCGGA CAAACTCCCC ATTTTGATTA TGTGTGTGCA 
GAAGTGACTA AAGGTATTGC TGCCGTTAGT TTTCAAACAG GGGTTCCGGT AATTTTGGGA 
ATTTTAACCA CCGATACCAT GCAACAAGCG TTAGAACGCG CTGGAATTAA GAGTAATTTA 
GGCTGGAATT ATGCGTTAAA TGCCTTGGAA ATGGCCAGTT TAATGGGACA AATTCAGCAA 
CAGTTTCCCC TTTCAACCTA TGCAGAACAT AATATCACTG CGTTACCCGT TTCTTCTAAT 
AATAATCAAG TCAATTTAGA GTCTTTTTCA GAATTGTCTG ATGAACCTCA ATAA
 
Protein sequence
MATFEGTFTQ DPSLLRFAIV IGRFNDLVTG KLLSGCQDCL KRHGINIDPN GTQVDYAWVP 
GSFEVPLVAR QLALSGRYNA IICLGAVIRG QTPHFDYVCA EVTKGIAAVS FQTGVPVILG 
ILTTDTMQQA LERAGIKSNL GWNYALNALE MASLMGQIQQ QFPLSTYAEH NITALPVSSN 
NNQVNLESFS ELSDEPQ