Gene PCC8801_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_2417 
Symbol 
ID7106011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp2494502 
End bp2495047 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content35% 
IMG OID643475460 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_002372584 
Protein GI218247213 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTA TTCCAACAAA AATTCCTGAT GTAATGATCA TTGAACCCAA TGTATTTGGA 
GATGATCGGG GCTTTTTTTA TGAAAGCTTT AATGCTAAAA AGTTTGCTGA AGAAACAGGT
GTTAATCCTA ATTTTGTTCA AGATAATCAT TCTAAGTCAG GTAAAAATGT CTTACGAGGA
CTTCATTATC AAATTCAACA AACCCAAGGC AAATTAGTTC GGGTTGTGGT CGGAGAAGTG
TTAGATATTG CTGTTGATAT TCGTAAAAGT TCTCCTAGTT TTGGTCAATG GGTTGGCTGT
ATTTTAAATA CAGAAAATAA GCGTCAATTT TGGGTTCCTG AAGGATTTGC CCACGGGTTT
GTTGTCTTAT CAGATGTCGC AGAATTTTTG TATAAAACAA CGGATTATTA TGCCCCACAG
TACGAAAGAA GTATTCTTTG GAATGATCCA GATATTAACA TTGACTGGCA AATAACTGAT
CAACCTATCT TATCAAAAAA AGATCAATTA GCAAGTCGGT TAAAAGACGC AGAAGTATTT
GAGTGA
 
Protein sequence
MKVIPTKIPD VMIIEPNVFG DDRGFFYESF NAKKFAEETG VNPNFVQDNH SKSGKNVLRG 
LHYQIQQTQG KLVRVVVGEV LDIAVDIRKS SPSFGQWVGC ILNTENKRQF WVPEGFAHGF
VVLSDVAEFL YKTTDYYAPQ YERSILWNDP DINIDWQITD QPILSKKDQL ASRLKDAEVF
E