Gene PCC8801_2029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_2029 
Symbol 
ID7104794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp2101552 
End bp2102541 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content43% 
IMG OID643475088 
Producthopanoid-associated sugar epimerase 
Protein accessionYP_002372220 
Protein GI218246849 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR03466] hopanoid-associated sugar epimerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTA AAGCATTTAT CACAGGAGGA ACCGGATTTA TTGGGGCGAA TTTAGTTCGG 
TTATTATTAG ACCAAGGTTA TGAAGTCCGC GCATTAGTGC GTTCCCAAAG CCGTTTAGAT 
AACCTAAAAG GGCTTGATAT TGAATTAGTA GAAGGAGATC TCAATGATGC CAATTTATCA 
GAAAAAATCA GAGGAACTAA CGTCTTATTT CATGTAGCCG CCCACTATTC CCTTTATCAA 
CGCGATCGCC ACCAACTTTA TCAAAGTAAT GTTTTAGGAA CCCGTTCCGT TTTAAAAGCA 
GCCCAACAAG CCGGAATTGA ACGTACCATT TACACCAGTT CCGTCGCTGC TATTGGCGTT 
GGAAACCCAT CAGAAATCGT CAACGAAACC CATCAAAGTC CCGTTGAAAA ATTAGTAGGA 
CACTACAAAA AATCAAAATA TTGGGCTGAA CAAGAAGCCA AAAAAGCCGT TCAAAAAGGA 
CAAGATATCG TCATCGTTAA CCCCAGTACC CCCATCGGTC CGTGGGACAT CAAACCCACT 
CCAACAGGAG AGATTATCCT GCGGTTTTTA CGCCGTAAAA TGCCCGCCTA TGTAGATACT 
GGATTAAATT TAATTGACGT GCGAGACGTA AGTTGGGGTC ATCTGTTAGC CTTAGAAAAG 
GGTAAATCTG GAGAACGCTA TATTTTAGGT CATCAAAATC TCAGTCTCAA AGCCCTATTA 
GACCAATTAT CCAGCCTCAC TGGATTAAGT GCACCCCAAA GAACTATCCC CTTGTGGCTA 
CCCCTAACCA TGGCATGGAT TGACGAATCC CTTCTTACTC CTTTAGGAAA AACCCCGTCC 
CTTCCCTTAG ATGGCGTTCG GATGTCTAAG TCACCGATGT ATTACGATGG ATCAAAAGCC 
GTCAAAGAAT TAGGGTTGCC CCAATCACCT ATTAAAAAAG CCCTCCAAGA TGCAATTAGT 
TGGTTTATCG ATCAAGGCTA TTCTTATTAA
 
Protein sequence
MAIKAFITGG TGFIGANLVR LLLDQGYEVR ALVRSQSRLD NLKGLDIELV EGDLNDANLS 
EKIRGTNVLF HVAAHYSLYQ RDRHQLYQSN VLGTRSVLKA AQQAGIERTI YTSSVAAIGV 
GNPSEIVNET HQSPVEKLVG HYKKSKYWAE QEAKKAVQKG QDIVIVNPST PIGPWDIKPT 
PTGEIILRFL RRKMPAYVDT GLNLIDVRDV SWGHLLALEK GKSGERYILG HQNLSLKALL 
DQLSSLTGLS APQRTIPLWL PLTMAWIDES LLTPLGKTPS LPLDGVRMSK SPMYYDGSKA 
VKELGLPQSP IKKALQDAIS WFIDQGYSY