Gene PCC8801_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1966 
Symbol 
ID7104746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp2042484 
End bp2043947 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content45% 
IMG OID643475028 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002372160 
Protein GI218246789 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCC CTATCATCGG TAAACTCAAT CGTCCCCTAC CTTGGATTTT AGCCCTCATG 
ACCGGTGGCG TTCTACTGGT GGGGGTAACA ACCTATAAAA TGGTCGAAAC CCCTTCCGAA
CAAGTCGAAC TCAACAAGTT AACCGTCCCC GTCGAACGAG AAACCCTACC GATAGAAATT
GAAGCAAGCG GAACCGTAGA ACCGATTGAA AGTGTCAATA TTAGCCCCAA AACCCCTGGA
AGATTAGTTA GACTCCTGGT AGAACAGGGA ATGCCCGTCA AAGAAGGGCA AGTTCTTGCA
GTGATGGAAA ATACCGAAAT CAGAGCCCAA GGAAAGCAAG CGCAAGCTAA TTACGGACAA
GCGATGGCTA CCCTCGAATC CGCTAAAATT CGTATTCCTA ATGAAATTAA CCAAGCGCAA
ACCCGCTTTA TGCAAGCCCA AGCACAGCTA GAAGCAGCTA AAGCGAATTT AGAGCAAGCA
AAACAAAGGA TTCCCAAAGA TGTTGAGCAA CTGCAAGCCC AATTGATTGC GGCTCAATCG
AGAGCACAAT TAGCTTCCTC CCGTGTGACT CGTAATCGAG AATTGAAGAA TGAAGGGGCG
ATTACGGAGG ATAGTTTTGA CGCAGTGCTT AATGAGGCCT ATAATGCCCA AGCTAATGTC
AGAGAAATTG CGCAAAAGCT AGAACAAGCC AAAAATACGG CTCCCCCAGA AATTGGTCAA
CTTCAACAGG TCATTTATCA AGCTGAAGCG GCTCTCATGG ATGCCAAACT TGCTCTAGAA
GAACGTAAAA ATACCGCTCA AACTGAAATT GCTCAACTCG AAGCAGCAGC AGCAGCAGCC
CAAGCAGAAG TCGAAAGAAT CGTTATCCAG TTCCAAGATA CCGCCATTCG GGCTCCGTTT
GATGGTATTG TCACCCAAAA ATACGCCAAT GTTGGGGCGT TTGTTACTCC CACTACTTCC
GCTTCGAGTA CTGCTTCGGC GACTTCGAGT TCTATTTTAG CCTTAGCGCG AGGGTTAGAA
GTAGTGGCCA AAGTTCCTGA AGTGGATATC GGACGCTTAC AACGGGGACA GCCGGTCAGA
ATTATGGCTG ATGCCTATCC TAATGACACT TTTGAAGGCC AAGTTATTCG GATTGCTCCA
GAAGCGATTG TTGACCAAAA TGTTACCTCG TTTGAAGTCA CCATTGGCTT GATTACAGGA
CGGGATAAAC TCAAGTCTAA AATGAATGTA GATGTTACGT TTTTAGGGCA ACAATTGAGT
GATGCGTTGG TTATTCCTAC CGTTGCTATT GTTACCCAAG AAGGCGAAAC GGGAGTCATG
GTTCCCGATG CAGAAAATAA CCCCGAATTT AAACCCGTTA GTATTGGATT AGTGTTAGAT
GATAAAACGG AAATTCTGTC AGGATTAGAA CCCGGAGAAC GGGTTTTTAT TGATTTACCT
AAACCCAAAG AAAAGAAACC TTAA
 
Protein sequence
MEAPIIGKLN RPLPWILALM TGGVLLVGVT TYKMVETPSE QVELNKLTVP VERETLPIEI 
EASGTVEPIE SVNISPKTPG RLVRLLVEQG MPVKEGQVLA VMENTEIRAQ GKQAQANYGQ
AMATLESAKI RIPNEINQAQ TRFMQAQAQL EAAKANLEQA KQRIPKDVEQ LQAQLIAAQS
RAQLASSRVT RNRELKNEGA ITEDSFDAVL NEAYNAQANV REIAQKLEQA KNTAPPEIGQ
LQQVIYQAEA ALMDAKLALE ERKNTAQTEI AQLEAAAAAA QAEVERIVIQ FQDTAIRAPF
DGIVTQKYAN VGAFVTPTTS ASSTASATSS SILALARGLE VVAKVPEVDI GRLQRGQPVR
IMADAYPNDT FEGQVIRIAP EAIVDQNVTS FEVTIGLITG RDKLKSKMNV DVTFLGQQLS
DALVIPTVAI VTQEGETGVM VPDAENNPEF KPVSIGLVLD DKTEILSGLE PGERVFIDLP
KPKEKKP