Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_1856 |
Symbol | sdhA |
ID | 7101783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | + |
Start bp | 1946231 |
End bp | 1947958 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643474922 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_002372055 |
Protein GI | 218246684 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTACAAC ACGATGTCAT TATTATTGGT GGTGGGTTAG CTGGATGTCG CGCCGCCTTA GAAATTAAAC GCCTCACCCC TACCGTGGAT GTAGCCGTTG TCGCCAAAAC CCACCCCATC CGTTCCCATT CCGTCGCCGC CCAAGGAGGG ATCGCAGCGA GTTTAAAAAA CGTTGATCCT AATGATAGTT GGGAAGCCCA CGCTTTTGAT ACCGTCAAGG GTTCAGACTA CCTAGCCGAC CAAGATGCCG TCGCCTTGTT AACTCAAGAA GCCCCCAATG AGATCATTGA TTTAGAGCAT TTAGGGGTGT TATTTTCGCG TTTAGACGAT GGTAGAATCG CTCAAAGAGC CTTTGGTGGT CATACCCACA ACCGTACCTG CTACGCCGCC GATAAAACCG GCCACGCCAT TCTCCACGAA TTAGTCAACA ACCTACGACG GAACGGCGTG ACTATCTACG ACGAATGGTA CGTCATGCAA CTGATCCTCG AAGACGGGGA CGCAAAAGGC ATCGTCATGT ACCATATTGC CGATGGTTAT TTGGAAATTG TCCAAACCAA AGTCGTTATG TTCGCCACAG GAGGCTATGG GCGGGTTTTC AACACTACGT CTAATGATTA TGCCTCTACG GGGGACGGCT TAGCCATGTC TGCGATCGCG GGTATTCCCT TGGAAGATAT GGAATTTGTG CAGTTTCATC CCACTGGATT ATACCCTGTT GGGGTCTTAA TTTCTGAAGC CGTACGGGGA GAAGGAGCCT ATCTCATTAA TAGCCAAGGA CGGCGGTTTA TGGAAGATTA CGCCCCCTCA CGCATGGAAT TAGCCCCCCG TGATATTACT TCCCGCGCTA TTACCCGCGA AATTCGTGCC GGACGGGGAG TATATCCCGA TGGTCGTCCA GGGGGTCCCT GTGTCTATCT CGACTTGCGT CACATGGGTA AAGACATGAT CCTCAGTCGC GTTCCCTTCT GTTGGGAGGA AGCTAACCGA CTGGTGGGAG TGGATGCTAT TTATGAACCG ATGCCTGTGC GTCCTACTGC CCATTATTGC ATGGGAGGGA TTCCTGTTAA TACTGAAGGA CGGGTTCGCT TGAGTGGAAC GCAGTTGGCA GAGGGGTTCT TTGCGGCCGG GGAATGTGCC TGTGTGTCGG TTCATGGGGC TAACCGTTTA GGCAGTAATT CTTTGCTGGA ATGTGTCGTT TATGGGCGAA TTACGGGGCG CAATATCGCT GAATATGTCC AGGGTCGAAA GTTTTCTGAC TTTGATGTTC AGGGCTATTT AAACGCGGCT AAAAGTCGTA TTGAAACCCT TTTGAGTAAA AAAGGAACAG TTCGCATCGG GGCATTACGG CAGGAATTTC AAGACTGTAT GAGTGACCAT TGTGGGGTGT TTCGGACTCA AGAGGGAATG CAAGAAGGAC TCAACAAAAT TGAAGCTTTT AAACAACAAT ACGAGGAGGT TTATTTAGAC GATCAAGATA CTTGTTGGAA TACCGAATTA ATTGAGGCAA TGGAATTACA AAGTATTATG GCAGTGGGGG AAATTATTCT CACTTCTGCT TTAAACCGTC GAGAAAGTCG CGGGGCTCAT TCGCGGGAAG ATTATACCCA ACGCGATGAT CCCAACTTTC TTAAGCATAC GTTAGCCTAT TATTCCCCCG CAGGAATTGA TGTTCAATAT ATGCCTGTGG TGATTAATAT GTTTGAACCG AAAGAACGCA AATATTAA
|
Protein sequence | MLQHDVIIIG GGLAGCRAAL EIKRLTPTVD VAVVAKTHPI RSHSVAAQGG IAASLKNVDP NDSWEAHAFD TVKGSDYLAD QDAVALLTQE APNEIIDLEH LGVLFSRLDD GRIAQRAFGG HTHNRTCYAA DKTGHAILHE LVNNLRRNGV TIYDEWYVMQ LILEDGDAKG IVMYHIADGY LEIVQTKVVM FATGGYGRVF NTTSNDYAST GDGLAMSAIA GIPLEDMEFV QFHPTGLYPV GVLISEAVRG EGAYLINSQG RRFMEDYAPS RMELAPRDIT SRAITREIRA GRGVYPDGRP GGPCVYLDLR HMGKDMILSR VPFCWEEANR LVGVDAIYEP MPVRPTAHYC MGGIPVNTEG RVRLSGTQLA EGFFAAGECA CVSVHGANRL GSNSLLECVV YGRITGRNIA EYVQGRKFSD FDVQGYLNAA KSRIETLLSK KGTVRIGALR QEFQDCMSDH CGVFRTQEGM QEGLNKIEAF KQQYEEVYLD DQDTCWNTEL IEAMELQSIM AVGEIILTSA LNRRESRGAH SREDYTQRDD PNFLKHTLAY YSPAGIDVQY MPVVINMFEP KERKY
|
| |