Gene PCC8801_1837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1837 
Symbol 
ID7104980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp1927111 
End bp1928145 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content42% 
IMG OID643474903 
ProductTPR repeat-containing protein 
Protein accessionYP_002372036 
Protein GI218246665 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAATT TTACCCCTAA AATCAAACGA GTCACGAAAC CGACTGACAA AAGCGGATTA 
GCAAGGATGG CTTTGCAACT CGTCCAAGAA AACCGCTATG ATGAAGCTTT GTTAGCTTTT
CAAGAAATTC TTGAACAAGA TCCCAATACC AAACAAGCTC ATCTAGGAAT TGGCAGGATC
TATTTGAAGC AAAAAGATTA CCAAGGAGCC TTGACTCACT TCCAAACCGC CAGAAACCTA
GATCCGATGA TGGTTCAAGC GTCTTTAGCC ATTGGCAATG CTTATTACGA GCTAAAGCAA
CTAGAATTAT CAATGCAAGC TTTTCAAGAC GCAGTCAATA TTGATCCTAG CGATGCAACG
GGGTATTTGG GGATTGGTCG AGTTCTCATC AAGCAAAAGC AATATCCTCA AGCCAAGGAG
CAATTGCAAA AAGCTCTAGT CCTCAATCCG CAGTTGATAC TAGCCCGTCT GCTCATGGCT
CAGATTTATC AGGAACAGGG GGATATAGAT CAAGCTATTA CTGAAATAGA ATCAGTCCTC
AAGCTCAATC CCACCCTCTC CAATGCCTAT CAAGGGTTAG GAAATCTCTA CCTGAAACAA
GAAAAATATG CCCTAGCTCG GAAAAACTTT GAACAAGCTC AGCAATTAAA TCCCAAGATT
CCAGCAGCAG CTAAACTGCC TTATCTAGAA GTTTTAGTCC AAGATAACGC CCTCGATGAA
GCAACAGCTA TTCTAAAGGA AATGCCCAAC CAAAAACCCC TCGAAGTGAG AAAACAAAAA
CTATGGGGAG ATATTTATGT CCGTCAAGGC TTCCTCGAAG AAGCCCTACA ATCTTACCGA
TCAGCTGCTT TACTGGCAGC AGAAGAGGGA GAGATAAGAA ATGAGCTTTC GGATTTAGAT
CCGTTACTAC AGAAAGCCCA AACTGACTTA AAAGCCTTAG TAGAAATCTA CAAAGCCAAA
GCAATTGAGC GAATTTCAAC AATGAAACTC CCGGAGAATG CGACGGACAG GACAGCATTA
GATTCTTTAT TCTAG
 
Protein sequence
MSNFTPKIKR VTKPTDKSGL ARMALQLVQE NRYDEALLAF QEILEQDPNT KQAHLGIGRI 
YLKQKDYQGA LTHFQTARNL DPMMVQASLA IGNAYYELKQ LELSMQAFQD AVNIDPSDAT
GYLGIGRVLI KQKQYPQAKE QLQKALVLNP QLILARLLMA QIYQEQGDID QAITEIESVL
KLNPTLSNAY QGLGNLYLKQ EKYALARKNF EQAQQLNPKI PAAAKLPYLE VLVQDNALDE
ATAILKEMPN QKPLEVRKQK LWGDIYVRQG FLEEALQSYR SAALLAAEEG EIRNELSDLD
PLLQKAQTDL KALVEIYKAK AIERISTMKL PENATDRTAL DSLF