Gene PCC8801_1580 details

Gene Information

• Locus tag: PCC8801_1580
• ID: 7102339
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: -
• Start bp: 1655829
• End bp: 1656479
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643474652
• Product: two component transcriptional regulator, LuxR family
• Protein accession: YP_002371788
• Protein GI: 218246417
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGACA ACTCAGGAAA AGATAGCAAC CGCCTCTTAT TGATTGACGA TGATCCTAAC 
CTCATTTTAC TCGTTAAGGA TTATTTAGAA TTTCAAGGAT ATGAAGTCAC TACGGCTGAA 
AACGGTCGAG AAGCCCTAGA AATTCTGGCG AATCAAGTCC CCGATATGAT TATCTGTGAT 
GTAATGATGC CAGAGATGGA TGGTTATGCT TTTGTGGAAA AAGTCAGACA AGATCGCCGT 
CTTAGTTGGA TTCCTGTGAT GTTTTTGTCC GCTAAGGGGC AAAGCCAAGA TCGCGTTAAG 
GGGCTCAATA CTGGGGCTGA TGTGTACATG GTCAAACCGT TTGAACCCGA AGAGTTAGCC 
GCCCAAGTCG AGTCTTCTTT GAGTCAGGCC AGACGACTGA TGGAACACAA GGCCGGAATT 
TCTCTTGATG AAGCTCATAA AATTCAAGTT CCTAGCAATG TGGAATTAAC CCCAACGGAG 
TTAAAGGTGA TTCAGTTGGT TGCCCAAGGT TTGTCTAATC GAGAAATTGC CAGTAAGCTC 
AATGTTAGTC AACGCACAAT AGAAAGTCAC GTCTCCAATA TGCTCAACAA AACGAGTCTC 
CATAATCGTA CGGAATTAGC TCGTTGGGCG ATGGAAAGCA ATATGGCTTG A 

 

Protein sequence

MKDNSGKDSN RLLLIDDDPN LILLVKDYLE FQGYEVTTAE NGREALEILA NQVPDMIICD 
VMMPEMDGYA FVEKVRQDRR LSWIPVMFLS AKGQSQDRVK GLNTGADVYM VKPFEPEELA 
AQVESSLSQA RRLMEHKAGI SLDEAHKIQV PSNVELTPTE LKVIQLVAQG LSNREIASKL 
NVSQRTIESH VSNMLNKTSL HNRTELARWA MESNMA