Gene PCC8801_1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1474 
Symbol 
ID7105859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp1547836 
End bp1550688 
Gene Length2853 bp 
Protein Length950 aa 
Translation table11 
GC content44% 
IMG OID643474549 
ProductHpt sensor hybrid histidine kinase 
Protein accessionYP_002371686 
Protein GI218246315 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGAAT GTATCCAAAA GCCGATTCCC TTTCTCACTC GTTTAAAAAT TGCCAAAGGT 
AAAACAACGA ACAATATGAC ACTTAGCAAA TTTAAAACAC GCAAGACAAC CCTTCGCTAT
TTAGGGCTAA CCAGTATGGG GTTAATCCTA GCTCAGTTGC TCTTTGGTGT AATTCAAGTC
CGTTGGCGTT ACTATCAACG AGTCGAAACC CTCAGAACTC AGGTAGAGGA CTTTGCTAAG
GAATTACAAA TCATTGCCCA AGACTCGCAA AAACTGAATG ATTCGACCCT CGATAGACTA
ATTAGACGCA GAAGCACCGG TAATGCTATT ATCTATGGCC TCATCCTTGA TAACCAAGGT
CGTATGATCA CCAGTTTTTT GAATCAGGAA GATCCTGCTA TTACCCAAGC CTTAACCTAT
CAACAATTAG AAACCCTAGA CGTTAAAACG CTGATCGATG CTGTTAAAAA GCAGAAAAAA
ATTAGAGAAA TTCGACAACC CATTATTATT GGCGGAAAAT CCCACGGAGA AATTCGGCTG
GCTTATTCTT TAGCAGAAAC GACAGAAGAT ACTCTACGCT CAGCCAGTAA GATTTTAACC
GCTTCTCTGA CGGTTAGTGC CTTTTTAGTC CTCATTACCC TTGTCTTTTT CAGACGAGAA
GTGGCTCAAC CTCTCAAAAA ATTAGTCCAA GAAACCGAAG CTCTCCTTCC TCCAGAAAAA
CTACCAGATA TCCAAGAAAA AGACGAATTT AATCAATTAG AACTGTTGCT GACCACCCTA
ACTGAGCATT TCCACACCTT TAAAGAATTA GAATCCCAGA TGGCCAAACA AAAGACCATC
AAAGAAGTCA ACCAAGCCAA AAATGAATTT ATGGCTATGA TTGGCCACGA AATTCGGACT
CCCCTTAATG CCGTCACAGG AATGACAGGA TTATTGTTAG ATACCCCGTT AAATCCCCAA
CAAGAAGAAT TTGTGAACAT CATCCGTAGC AGTGGGGAAA ATCTGTTGAC GATGATTAAT
AATATTTTAG ATTTCTCAAA AATTGAAGCG CAAAAACTGG AATTGGAAGA ACAACCCTTT
GAACTGGGAT TGTGTATTGA GGAAGTCCTG CGGTTATTTG TCCCCCAAGC CTCCCAAAAG
CAGTTAGAAC TAGCCTATCT CATCGAACCC AATACCCCCA GTGCCATTGT AGGAGACAGT
ACCCGATTGA GGCAAATTTT GGCCAATCTT CTCGGTAATG CCGTGAAATT CACCGAAAAG
GGAGAAGTGG TGGTCTATGT CAGTGCCCAA CCCCTCCCCA ACAGCGATCG CACCGACAAA
ACCCTGGCTA ACTACGAACT GCGCTTTGCA GTAAAAGATA CAGGCATTGG CATTGCCCCC
CAAGACTGCG ATCGCCTCTT CCAACCCTTC AGTCAAGTGG ATGCGTCCAC GACCCGAAAA
TACGGCGGAA CGGGCTTAGG ATTAGTCATT AGTCAACGGT TAAGTGAACT TATGGGGGGG
AAAATGTGGG TTCACAGTAC CGAGGGCAAA GGCTCAACCT TTTACTTCAC CATCCAGGCT
CAAGCGACCC CAAGTTCTTC TCCTGCCACC TCCCAACAAG GACAACAGGA ATTAATGGGT
AAACGGATGT TGATTGTGGA TGATAACCTC ACTAATCGCA AAATTTTGAC CCTACAAGCG
CAATCCTGGG GAATGTTTAC CTGTGCCGTG GATTCGGGGG CTAAAGCCCT AGAATGGCTC
GAACAAGGCA TTACCTTTGA TGTGGCCATT TTAGATGTGA GTATGCCTCA GATGAACGGA
GTCACCTTAG CCCAAGCCAT TCATCAACAG CCGCAATGCA AGCATTTACC CCTGATTATG
TTTAGTTCTA TTGGTCAACA GGAAATGCCC CCACAGTCTG ACTCTAGCCA ATTTGCTGCC
GTGTTGATCA AACCCATTCA GCAATCAAAA CTCTATGACA GCTTAATGCA GATTTTTTCG
AGAAAACCCA TCTGTGTCAC CCAAGGGATC ACCGAGGTAG GAGATCAATC CCTAACCAAC
AAACAACCCT TAAGGATTCT GGTAGCAGAA GATGTAGTGG TCAATCAACG GGTGATTTCC
TTGTTATTAG AAAAATTAGG CTATTGTGCC GATATTGTTA GTGATGGGTT TGAGGTATTA
GAAGCCTTGC AGCGTCAACC CTATGATGTC ATTTTAATGG ATGTGCGAAT GCCAGAAATG
GATGGTTTCA CAGCAACACA ACGGATTAAC CAAGAATTTC CTCTCCATCA GCGACCGCGC
ATTATTGCTA TGACCGCAGA AGCGATGCGA GGCGATCGCG ATAAGTGTTT GGCGGCGGGG
ATGGATGATT ATATTTCTAA ACCCATTCGC TTAGAAGAAC TCAAACAAGC GTTATCCCGA
TGTCACATCC TCAAAGACAC ACCCGTTCTG GATCGAAAAA TTCTGGAGTC TTTGGAGAAA
ATGGCGGGAA ATAAAGCCAA AGATCTGCTT CATGATTTGA TTATGGCTTA TTTTGACGAT
GCTCCCTCGC GAATATCAGC GATAACGGAA GCGATCGCCA AAAATGACCC CTTCGCTTTG
CGTCAAGCTG CCCACGCGCT GCGATCAGCT AGTGCGAATT TGGGAGCTAA GCAGTTGTCT
GTTGTTTGTC AGGAATTGGA AATGATGGGA CGCAATAGCC AGATAGTCGA AGCAAATCAG
AAACTTTCTG CCCTTAAAAT GGAGTATGAT CAAGTCTGTC TTGCGTTACA AAAGGAACTT
CAAGAAACTT GTCATTGTTC TGTGTTGCTC CCCTCTATTT CCCGTGAAAA CTTACCCTAT
TTTCGACAAG ATTCCCCTAG TCTTAGTTGT TGA
 
Protein sequence
MRECIQKPIP FLTRLKIAKG KTTNNMTLSK FKTRKTTLRY LGLTSMGLIL AQLLFGVIQV 
RWRYYQRVET LRTQVEDFAK ELQIIAQDSQ KLNDSTLDRL IRRRSTGNAI IYGLILDNQG
RMITSFLNQE DPAITQALTY QQLETLDVKT LIDAVKKQKK IREIRQPIII GGKSHGEIRL
AYSLAETTED TLRSASKILT ASLTVSAFLV LITLVFFRRE VAQPLKKLVQ ETEALLPPEK
LPDIQEKDEF NQLELLLTTL TEHFHTFKEL ESQMAKQKTI KEVNQAKNEF MAMIGHEIRT
PLNAVTGMTG LLLDTPLNPQ QEEFVNIIRS SGENLLTMIN NILDFSKIEA QKLELEEQPF
ELGLCIEEVL RLFVPQASQK QLELAYLIEP NTPSAIVGDS TRLRQILANL LGNAVKFTEK
GEVVVYVSAQ PLPNSDRTDK TLANYELRFA VKDTGIGIAP QDCDRLFQPF SQVDASTTRK
YGGTGLGLVI SQRLSELMGG KMWVHSTEGK GSTFYFTIQA QATPSSSPAT SQQGQQELMG
KRMLIVDDNL TNRKILTLQA QSWGMFTCAV DSGAKALEWL EQGITFDVAI LDVSMPQMNG
VTLAQAIHQQ PQCKHLPLIM FSSIGQQEMP PQSDSSQFAA VLIKPIQQSK LYDSLMQIFS
RKPICVTQGI TEVGDQSLTN KQPLRILVAE DVVVNQRVIS LLLEKLGYCA DIVSDGFEVL
EALQRQPYDV ILMDVRMPEM DGFTATQRIN QEFPLHQRPR IIAMTAEAMR GDRDKCLAAG
MDDYISKPIR LEELKQALSR CHILKDTPVL DRKILESLEK MAGNKAKDLL HDLIMAYFDD
APSRISAITE AIAKNDPFAL RQAAHALRSA SANLGAKQLS VVCQELEMMG RNSQIVEANQ
KLSALKMEYD QVCLALQKEL QETCHCSVLL PSISRENLPY FRQDSPSLSC