Gene PCC8801_1445 details

Gene Information

• Locus tag: PCC8801_1445
• ID: 7103648
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: +
• Start bp: 1517143
• End bp: 1519080
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 643474521
• Product: Carbohydrate-selective porin OprB
• Protein accession: YP_002371658
• Protein GI: 218246287

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTAAAGT TGCGATCGCT GTTTCAAGTC CCTAGTGTCA TGTTAGGCAT GATGATGCTG 
ATGTCTGCGA GTTCTCAAGC TGTCCCGCTA TCCGAGTTAG CCGATCCTGA TTTTCGGCTA 
AAACAGTCCC GTGATGGTCT TTTGAACTCT AACCGTCGAA ATCAAGGCTC AATATCCCAA 
ATTATCAATG TTTCTGACCT AGAGACGCAA AATCGATTAT TCCCCAAATC AGATCGAAGA 
TTACCACTAA AACAGTCCCA TGAGGGATCA CTGTCCCAAG TGACTAATGT TTCGGACTTA 
CGAGACGTTT CCCCCACAGA CTGGGCTTAT GAAGCCTTGC GGGGGTTAGT GGAACGCTAT 
GGTTGTATTG TAGGGTATCC TGACCGTACA TTTAGGGGAC AGCGATCGCT GTCGCGTCAC 
GAATTTGCGG CGGGGTTAAA TGCCTGTTTA AACACCCTAG AACGGCTATT ACAGGAAAAT 
GTAGCGGTTT TACGCGAAGA TATCGAAAAA CTAAAGCGGT TAGCCAGAGA ATTTGAGGGA 
GAATTGATGG CATTGGGGGC AAGGGTGGGC AATTTAGAGG CTAGAACCGC TTACCTCGAA 
AATCATCAAT TTTCTACTAC AACTAAACTC ACGGGTGAGA TAGTCGTCGG GTTAACTGGA 
ATTACCCAAG GGGAGAAAAA CGAAGGAACC GAAGAGATCA ACAAAGTGAC GAACCTGGGA 
TATCGGGGAC GACTGGAGTT AAATACCAGT TTTGATGGGG ATGACTCCCT CTATATCCGT 
CTCGCAACAG GGACTGTACC CGTCTATTCT GACATTGCAG GGACATTTGA AGGCGATTTT 
GGCTTTTCAC AGCCTGATGA TAGCGATTTA GCGGTAGAAC TGATTATTTA CGAGTTTACC 
TTGGCGGAAA ACCTGCGGAT GTTCGTCGAA CCCGTTGGAG GGGCATTTGA TGACTTTACC 
CCGACGATCA ACTTTCTTGA TGGGGATGGG GCTTCCGGGG CGTTATCCGC ATTTGGGACT 
CGTAATCCCC TTTATTATAT GGCGGATGGT CCAGGAATTG GCTTTCAGGG AACGCTTTTT 
GAGGTTTTTG AATGGAGTGC CGGGTATTTA GCCACTGAGG GCAATAATCC GGGGTTAGGT 
CGAGGGATGT TTAATGGTCC CTATGGCGCG ATCGGTCAAA TTGCCTATAA ACCGAGTGAT 
GATTTTACGG TAGCGTTTAC CTATGTTCAT GGCTATAACA ATCTTGACAC GGGAACGGGA 
ACTCGTCGCT CTAATTTTCA AGCGTTTATT GAGGAGGAAT TTGAAACAGA TGTCAGGACG 
GTTAATAATT CCTATGGGAT GGAATTTAGT TGGCGTATTG CCCCCAAATT TGTCTTAGGA 
GGTTGGGCAG GGGTTACTAA GTCTAGAACT CAAAATGCCA TCAATATTGT CAGAGAATTA 
GTTGCTGAAG AAATCCCAAT AGAAGAACCA GTAATAGCGG CAGTTCCTCC TGAAGAAATC 
GCTACGGAAG AATTGTTGAC TGAAGAAAGT TTGCCCCAAG AAACATCCGT AGAAGAACCC 
CCAGTTCAAG AAGTTATTCC TGAAGAAATT GCTACTGAAG AAGTGCCAAC GGAAGAGTTA 
TTAACCATTG ATCGAGGCAA TATGGATATC TGGAATTGGG CGGTAACATT AGCTTTTCCT 
GATGCGTTTA AAGAAGGGGA TACAGCAGCG GTTATTTTTG GGATGCAGCC TTGGGTTTCT 
AAGTCTAATC TTAATTTACC TGATGGGTTA CGCAATAATG ATCGAGACAC TTCATATCAC 
ATTGAAGCGT TTTATCAATA TCCCCTCAAT GACAATATTT CAATTACCCC TGGCATCATT 
GTTATTACTG CCCCTGATTA TGATAACAAA AATGATGCTT TGGTCATTGG AACCATTCGG 
ACAACCTTTA GTTTTTAA 

 

Protein sequence

MLKLRSLFQV PSVMLGMMML MSASSQAVPL SELADPDFRL KQSRDGLLNS NRRNQGSISQ 
IINVSDLETQ NRLFPKSDRR LPLKQSHEGS LSQVTNVSDL RDVSPTDWAY EALRGLVERY 
GCIVGYPDRT FRGQRSLSRH EFAAGLNACL NTLERLLQEN VAVLREDIEK LKRLAREFEG 
ELMALGARVG NLEARTAYLE NHQFSTTTKL TGEIVVGLTG ITQGEKNEGT EEINKVTNLG 
YRGRLELNTS FDGDDSLYIR LATGTVPVYS DIAGTFEGDF GFSQPDDSDL AVELIIYEFT 
LAENLRMFVE PVGGAFDDFT PTINFLDGDG ASGALSAFGT RNPLYYMADG PGIGFQGTLF 
EVFEWSAGYL ATEGNNPGLG RGMFNGPYGA IGQIAYKPSD DFTVAFTYVH GYNNLDTGTG 
TRRSNFQAFI EEEFETDVRT VNNSYGMEFS WRIAPKFVLG GWAGVTKSRT QNAINIVREL 
VAEEIPIEEP VIAAVPPEEI ATEELLTEES LPQETSVEEP PVQEVIPEEI ATEEVPTEEL 
LTIDRGNMDI WNWAVTLAFP DAFKEGDTAA VIFGMQPWVS KSNLNLPDGL RNNDRDTSYH 
IEAFYQYPLN DNISITPGII VITAPDYDNK NDALVIGTIR TTFSF