Gene PCC8801_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1330 
Symbol 
ID7102217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp1382909 
End bp1384900 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content38% 
IMG OID643474412 
ProductABC transporter domain protein 
Protein accessionYP_002371549 
Protein GI218246178 
COG category[R] General function prediction only 
COG ID[COG4178] ABC-type uncharacterized transport system, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCTAT CGTCTCGGTT TCAGTTTGAT AAAAAACTCT GGATACGCTT TGTCAATACA 
GTACAACCTT ACTTTTTTCC CCTTGCTCCT AAACAAACGC GAATTTTTTT AGGATTAATT
CTCGTTTTAT TACTAGGGGT TATTGCCTTC ACGTTCTTTT TGTCCGTTGG ACTAACTTTC
TTGGGAAAAG CCATTTTTCC CGAATTTTTC AACACAGTTG CTAAAGAATT AATTGAGAAT
ATTGAAGGAT TATTAAAAAC TCGCGCTCCT TATATCGCCT TTGGGGTGCT ATCAGTTAGT
AGTTTTATTT TTGCTTCTCA AAGACGGAAG TTACAAGGAC GCTGGTTACA GTGGGGACTA
TTAGGATTAC TCTTATTTTT GCTGTTTGCT GTTAATGGAC TGAACGTCAC CCTAAGTTAT
GCTTTTCGCC TAATTGATAC CGCTTTAAAT CAAAGAGATC AGGGTGTTTT CTGGGAGAAT
ATTACTATTT ATGGATTAGT ATTAGTAATC GCTGTTCCTA TTATTATTGT CTATCGTTAT
TGCCGTCAAA AACTGGGTTT GTTGTGGCGA GAATGGTTGA CTAAAAATTT ACTGGATCGC
TATTTTAATC AACGAGCGTA CTATCAATTA GACTCTAATG CAGTCAACCC CGAAGTTGAT
AACCCAGATC AACGAATTAC CCAAGATGTT AAAGCCTTTA CCACCGTTAC CTTAGATTTT
CTGCTCGATA TTTTAGACTC AGTTTTAACC CTGCTTTCCT TTACGGCAAT TCTCTATAGT
ATTTCTAAAA CTTTAACCTG GGGACTAATT GCCTATGCAA CCTTTGGAAC GGTTATTGCT
ATTGTCATTG GGACACGATT AATCAAAATC AATTACAATC AATTACGCTT AGAAGCGAAT
TTTCGGTATG GAATGGTTCG GGTACGAGAT AATGCTGAAT CCATTGCCTT TTATCAAGGA
GAAGCCTTAG AAAAACAACA AGTTATCCAA CAACTTATCG CTGCCGTTAA AAACTTCGAT
ATCTTAATTA TTTGGCAATC GTTGATTGCC TTATTTCAAT ATGGATATAA CTTTGTGACG
CGCTTAATTC CCTATATTAT TATGGCTCCT CTTTACTTTG AAAGAAAAGC CGAATTTGGA
GAAATTACCC AAGCGACGAT CGCCTTTAGT CAAGTGCTGA TGGCACTGTC TTTTATCACC
AACCAAATTG AAGGAATTAC CGAATTTGCA GCCAGTATTA ATCGTTTAGG AGAATTTGAA
GAATCCTTAG ATGATCCCTC TAGCATCAAA AAAATCAAAG AAGATGAACG GGTTAAAATT
ACCTATATTG ACTATCAAGA AAACCCTGAA ATTAGCCTAC AGGAATTAAC CCTAAAAACA
CCTAACTTTG CTAGAATTTT AATCGAAGAT TTATCCGTTG CGGTGGAGAC TGAGAATAAT
TTATTAGTCA TGGGAGCCAG TGGTTCAGGC AAAAGTTCTT TGTTGAGAGC GATCGCACAA
TTATGGACAT CAGGAAGTGG AATTATTGCG CGTCCTCCCC TAGAAGAAAT GCTATTTTTA
CCTCAACGTC CCTATATGAT TGTGGGAACA TTACGGGAGC AATTATTGTA TCCTAATTTG
AATAACAAAA AAGTCGATGA TCATCAGTTA GAAGCCATTC TAGAAATTGT TAATCTACCG
AATTTAGTCA GTCGATTTGA GCAAGGACTC GATACCGCAG AAAACTGGGA AAATATTCTT
TCATTAGGAG AACAACAACG AGTCGCCTTT GCTCGTATTC TCGTCAGTCA GCCTCGCTAC
GCTATTTTAG ATGAAGCTAC CAGTGCTCTC GATGTGGCCA ATGAACAGAT CCTCTACGAA
AAACTATCCC ATCAAGGAAC CACCTATATT AGTGTGGGAC ATCGACCCAC CTTAAAACAG
TACCATCAAC AACTATTAGA AATCTTTGAA GGAGGAAGTT GGGATCTCAA AACAATTGAT
AATGGACAAT GA
 
Protein sequence
MALSSRFQFD KKLWIRFVNT VQPYFFPLAP KQTRIFLGLI LVLLLGVIAF TFFLSVGLTF 
LGKAIFPEFF NTVAKELIEN IEGLLKTRAP YIAFGVLSVS SFIFASQRRK LQGRWLQWGL
LGLLLFLLFA VNGLNVTLSY AFRLIDTALN QRDQGVFWEN ITIYGLVLVI AVPIIIVYRY
CRQKLGLLWR EWLTKNLLDR YFNQRAYYQL DSNAVNPEVD NPDQRITQDV KAFTTVTLDF
LLDILDSVLT LLSFTAILYS ISKTLTWGLI AYATFGTVIA IVIGTRLIKI NYNQLRLEAN
FRYGMVRVRD NAESIAFYQG EALEKQQVIQ QLIAAVKNFD ILIIWQSLIA LFQYGYNFVT
RLIPYIIMAP LYFERKAEFG EITQATIAFS QVLMALSFIT NQIEGITEFA ASINRLGEFE
ESLDDPSSIK KIKEDERVKI TYIDYQENPE ISLQELTLKT PNFARILIED LSVAVETENN
LLVMGASGSG KSSLLRAIAQ LWTSGSGIIA RPPLEEMLFL PQRPYMIVGT LREQLLYPNL
NNKKVDDHQL EAILEIVNLP NLVSRFEQGL DTAENWENIL SLGEQQRVAF ARILVSQPRY
AILDEATSAL DVANEQILYE KLSHQGTTYI SVGHRPTLKQ YHQQLLEIFE GGSWDLKTID
NGQ