Gene PCC8801_1230 details

Gene Information

• Locus tag: PCC8801_1230
• ID: 7104923
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: +
• Start bp: 1280249
• End bp: 1281331
• Gene Length: 1083 bp
• Protein Length: 360 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 643474315
• Product: riboflavin biosynthesis protein RibD
• Protein accession: YP_002371452
• Protein GI: 218246081
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0117] Pyrimidine deaminase; [COG1985] Pyrimidine reductase, riboflavin biosynthesis
• TIGRFAM ID: [TIGR00227] riboflavin-specific deaminase C-terminal domain; [TIGR00326] riboflavin biosynthesis protein RibD

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTCGC CAGACTTTGA CCAACAGATG ATGCAGCGAT GTCTGCAATT AGCCCGTCAA 
GCATTAGGAC AAACTTCCCC TAATCCGTTA GTGGGGTCGG TAATTGTCCA AAATGGTGAG 
ATCGTGGGTG AGGGGTTTCA TCCAAAAGCC GGAGAACCCC ATGCAGAAAT TTTTGCCCTC 
AGACAAGCCC AAGAACGGGC AAAGGGAGCA ACGGTTTATG TTAGCCTAGA GCCCTGTAAT 
CATTATGGCC GAACCCCTCC GTGTACGGAC GCTTTAATTG CTGCGGGGGT GAGTAAAGTG 
GTGGTGGGAA TGGTAGATCC AAACCCCTTG GTATCGGGAA AAGGGGTTGA AAAGCTTCAA 
GAAAGCGGAA TTGAAGTGGT TGTTGGCGTT GAAGAGTCCG CTTGTCGTCA GTTGAATGAG 
GCGTTTATCC ATCGTATTTT GCACCATCAA CCCTTGGGTA TCTTAAAATA TGCCATGACC 
CTTGATGGTA AAATTGCAGC GACTACTGGT CATAGTGCTT GGATAACGGG CACAGCTTCG 
CGTCAGCTCG TCCATCAGGT TAGGGCAGCC TGTGATGCGG TGATCGTCGG AGGAAATACC 
CTCAGAAAGG ACAATCCCAA TCTGACCACC CACGAAGTAG CAGGGGTTAA TCCCTTGCGG 
GTGGTGATGA GTAAAACTCT GGATTTGCCT TCTGAGGCTA ACCTTTGGCA AACCGATATA 
GCTTCTACAC TGGTTATAAC AGAAAGGACT CGTAATAGTA AGTTACAAGC CCAATTGCGC 
AATCGGGGGG TTGAGGTGAT AGAGTTAGCG TCGGTGACTC CTTCTGGGGT GATGCAACTG 
CTTTATGAGA GGGGGTTATC GAGTGTGTTA TGGGAATGTG GAGGAACCTT AGCAGCACAA 
GCGATCGCCG ATGGTGTGAT ACAAAAGATT ATGGCTTTTA TTGCGCCTAA AATTATTGGG 
GGTACTATAG CACCTTGTCC TATTGGTGAT TTAGGATTAG AGAAAATGAC TCAAGCTTTA 
GCATTACAAC GGGTTACTTT ACAACAAATT GATGGAGATA TTCTCATTGA AGGATATTTA 
TAA 

 

Protein sequence

MNSPDFDQQM MQRCLQLARQ ALGQTSPNPL VGSVIVQNGE IVGEGFHPKA GEPHAEIFAL 
RQAQERAKGA TVYVSLEPCN HYGRTPPCTD ALIAAGVSKV VVGMVDPNPL VSGKGVEKLQ 
ESGIEVVVGV EESACRQLNE AFIHRILHHQ PLGILKYAMT LDGKIAATTG HSAWITGTAS 
RQLVHQVRAA CDAVIVGGNT LRKDNPNLTT HEVAGVNPLR VVMSKTLDLP SEANLWQTDI 
ASTLVITERT RNSKLQAQLR NRGVEVIELA SVTPSGVMQL LYERGLSSVL WECGGTLAAQ 
AIADGVIQKI MAFIAPKIIG GTIAPCPIGD LGLEKMTQAL ALQRVTLQQI DGDILIEGYL