Gene PCC8801_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1118 
Symbol 
ID7105071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp1174626 
End bp1175258 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content37% 
IMG OID643474207 
Product3'-5' exonuclease 
Protein accessionYP_002371345 
Protein GI218245974 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAT TAGAGAATTT TCAAGTCTGC GATCGCGATC TATCTGATGA AACCTTATCT 
CGTTATTTAG CAGCGACTGC TATCGCGGTA GATACAGAAA CCATGGGGTT AATTCCTCAA 
CGCGATCGCC TTTGTTTAGT TCAATTATGC GATCCTAGTG GATTTGTTAC CGCTATTCGC 
ATCGAACGAG GACAAAAAGA AGCCCCCAAG TTAAAACAAC TAATGGAAGC TAAAACTATT 
CTAAAAGTTT TCCATTATGC GCGGTTTGAT GTGGCTCAAT TGCGTTATCA TTTTGGCATT 
GAAACCCAAC CGATTTTTTG TACAAAAATT GCTAGTAAAT TAGCGCGTAC CTATACCAGT 
TCCCACGGAC TAAAAAGTTT AGTACAGGAA TTAGAAGGGA TTGAATTAGA TAAAACTTCC 
CAAAGTTCAG ACTGGGGAAA TTCGGCTAAT TTATCCGTAG CACAATTAAG TTATGCAGCC 
AATGATGTTC GGTATTTAAT CCCTGCAAAA GAGAAATTAA TCACGATGTT ACAACGGGAA 
GAAAGATGGC AATTAGCTGA GCAATGTTTT AATTGTATTC CGGTTTTTGT TTCTTTAGAT 
CTTGAACAAT ACAAAGATAT TTTTGAACAT TAA
 
Protein sequence
MTQLENFQVC DRDLSDETLS RYLAATAIAV DTETMGLIPQ RDRLCLVQLC DPSGFVTAIR 
IERGQKEAPK LKQLMEAKTI LKVFHYARFD VAQLRYHFGI ETQPIFCTKI ASKLARTYTS 
SHGLKSLVQE LEGIELDKTS QSSDWGNSAN LSVAQLSYAA NDVRYLIPAK EKLITMLQRE 
ERWQLAEQCF NCIPVFVSLD LEQYKDIFEH