Gene PCC8801_0965 details

Gene Information

• Locus tag: PCC8801_0965
• ID: 7104201
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: +
• Start bp: 1017777
• End bp: 1018475
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 643474057
• Product: Tetratricopeptide TPR_2 repeat protein
• Protein accession: YP_002371197
• Protein GI: 218245826
• COG category: [R] General function prediction only
• COG ID: [COG4785] Lipoprotein NlpI, contains TPR repeats

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGTA ATGCCCTTGA CTGTTGTGAT TCGAGGAGTC CTGAACCTCC CTCGAAAGCA 
GCTACCCCTA ACTGTTGGTA CCAACTAACA TTTGGGTTTC AAACTGGCCA TGAATCTCTT 
TCCACTGAAC AACTACGCAC TTGTATCAAG GAAAAGGCGG ATCAAGCTGA TTATCGCTGT 
GCGATCGCCC TACTCGATCA ACTGATTTTG CGAGACCCCG AAAGTGCGAT CGATTATAAT 
AATCGGGGAT TGATGTATTT TAAACAAGGG GACTATGATC AAGCAATCAA CGATTTTGAT 
CAAGCGATCG CCCTTAATCC TTATTTAGAT AAAGCTTATA ATAATCGGGC TAACTGTCAG 
GCTGAGTTAG GATATTTACT CTCAGCCCTA GGAGATTATG AAACTGCCCT AGATTTAAAC 
CCCTATAACC AACGCGCCTG GATTAACAAG GGTATGACGT TACGCGAATT GGGAAAGTAT 
GATCTAGCCC TAGAAACCTT TGATTTTGCC CTAATTCTTC AGAACACCCT ACAAGGCAGA 
ATTTATGGGG AACGAGGTTA TACTTATTAT CTGAGGGGCG ATTGGAACTG TGCGATCGCA 
GATTATTATC GCGCTTTGTC TGCGTTACCA GAGGGCGATC GCCATCGATA TAAAATCCAA 
GAATGGTTAT CTGATTTGCT CAATTCAACT TCAGTTTAA 

 

Protein sequence

MKSNALDCCD SRSPEPPSKA ATPNCWYQLT FGFQTGHESL STEQLRTCIK EKADQADYRC 
AIALLDQLIL RDPESAIDYN NRGLMYFKQG DYDQAINDFD QAIALNPYLD KAYNNRANCQ 
AELGYLLSAL GDYETALDLN PYNQRAWINK GMTLRELGKY DLALETFDFA LILQNTLQGR 
IYGERGYTYY LRGDWNCAIA DYYRALSALP EGDRHRYKIQ EWLSDLLNST SV