Gene PCC8801_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_0340 
Symbol 
ID7105362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp336153 
End bp337238 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content50% 
IMG OID643473448 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_002370594 
Protein GI218245223 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGGC AATACTGCAT AACCCTTCTT CCTGGCGATG GCATTGGACC CGAAATCTTA 
GCCGTTACGG TAGATGTCCT CAAAATTATT GGTCAGCAAT TTGACATCAC CTTTAACTTC
CAAGAAGCCC TCATCGGTGG GTCTGCCATT GATGCCACAG GAAACCCCCT CCCCGAAGAA
ACCCTCACCC TCTGTCGTAA CAGTGATGCC GTCCTATTAG CCGCCATTGG GGGCTATAAA
TGGGATAATC TGCCCCGTCA TCAACGGCCT GAAACGGGAC TCCTAGCCAT TCGTGCGGGA
CTAAACCTCT TTGCCAATTT GCGTCCGGCC ACCATTTTGC CCCAATTGGT CGATGCCTCC
TCCCTAAAAC GAGAAGTCGT CGAAGGAGTC GATATTATGG TCGTTCGAGA ATTGACTGGG
GGCATTTATT TCGGCCAGCC TAAAGGCATT TTTGAAACGG AAACCGGGGA AAAACGGGGA
GTCAACACCA TGGCCTATAC CGAGTCAGAA ATTGACCGCA TCGCTCAAGT AGCCTTTGAA
ACCGCCCAAA AACGGGGCAA AAAATTGTGT TCCGTTGATA AGGCAAATGT GTTAGATGTG
TCTCAATTAT GGCGCGATCG CGTCACGTTA ATGGCTGACC GATACCCCGA TGTCGAACTA
TCTCACCTCT ACGTTGATAA CGCAGCTATG CAGCTTGTGC GGGCTCCCAA ACAATTTGAT
ACCATCGTCA CGGGTAACTT ATTTGGAGAT ATCCTCTCGG ATGCGGCAGC GATGTTAACC
GGAAGCATTG GAATGTTACC CTCGGCGAGT TTAGGATTGG GAAAACCAGG ATTATTTGAA
CCCGTTCACG GTTCTGCCCC CGATATTGCC GGTCAAGATA AGGCAAACCC CTTGGCACAA
GTCCTCAGCG CAGCGATGAT GTTACGCTAT GGGTTAGATG AACCCGAAGC AGCCACTAAG
ATTGAACAGG GTGTTTTAGC GGTACTCGAT CAAGGCTATC GCACAGGGGA TATTATGTCT
CCAGGAATGA AAGCCGTCGG ATGTAAAGCG ATGGGAGAAG CTTTGGTGAA AGTTTTGGAA
TCATAA
 
Protein sequence
MTRQYCITLL PGDGIGPEIL AVTVDVLKII GQQFDITFNF QEALIGGSAI DATGNPLPEE 
TLTLCRNSDA VLLAAIGGYK WDNLPRHQRP ETGLLAIRAG LNLFANLRPA TILPQLVDAS
SLKREVVEGV DIMVVRELTG GIYFGQPKGI FETETGEKRG VNTMAYTESE IDRIAQVAFE
TAQKRGKKLC SVDKANVLDV SQLWRDRVTL MADRYPDVEL SHLYVDNAAM QLVRAPKQFD
TIVTGNLFGD ILSDAAAMLT GSIGMLPSAS LGLGKPGLFE PVHGSAPDIA GQDKANPLAQ
VLSAAMMLRY GLDEPEAATK IEQGVLAVLD QGYRTGDIMS PGMKAVGCKA MGEALVKVLE
S