Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_0278 |
Symbol | |
ID | 7104829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | + |
Start bp | 260166 |
End bp | 262016 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643473388 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_002370534 |
Protein GI | 218245163 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAAAA ATAATAAAAA ATGGCGTAAT GCCGGACTAT ATGCACTATT GTTAATTGTT GTTTTAGCCT TAGCTTCCGC CTTTTTTGAT CAACAGCCCC AAAGCCGAGA ACCCCTGACC TATACCGAGT TTATTAATCA AGTAGAAAAT AATCAAATCA CCCGCGTTAG CCTAAGTGCT GATCGCGCCG AAGCCAGAGT CCCCAACCCC AACGGGGGAG CCCCCTTAGT GGTTAACTTA CCCAATGATC CTGATTTAAT CAACATTTTG ACCAAACACA ACGTTGATAT CTCAGTTCAA CCCCAAACCG ACGAAGGGTT ATGGTTTCGG GTAGCCAGTA GCCTCTTTCT CCCCATCCTA CTCTTAGTCG GACTCTTCCT CCTTTTACGT CGTGCCCAAA GCGGCCCCGG TTCCCAAGCG ATGAACTTTG GCAAGTCCAA AGCGCGAGTC CAAATGGAAC CCCAAACCCA AGTTACCTTT GGCGATGTTG CAGGGATCGA ACAAGCTAAA CTCGAACTCG CTGAAGTCGT AGACTTCCTG AAAAACGCCG ATCGCTTCAC TGCCATTGGT GCAAAAATTC CCAAAGGAGT CCTCTTAGTT GGCCCTCCAG GGACGGGTAA AACCCTCTTA GCTAAAGCCG TCGCCGGAGA AGCCGGAGTC CCTTTCTTCT CCATCTCTGG GTCAGAATTT GTGGAAATGT TCGTCGGGGT GGGTGCATCT CGCGTTCGGG ATCTCTTTGA ACAAGCCAAA GCCAACGCCC CTTGTATCGT CTTCATCGAT GAAATTGATG CCGTTGGTCG CCAACGGGGG GCTGGTTTAG GCGGTGGTAA CGACGAACGG GAACAAACCC TCAACCAATT ACTCACCGAA ATGGACGGGT TTGAAGGCAA TACCGGCATT ATCATCATCG CTGCGACTAA CCGTCCCGAT GTCCTCGATG CTGCCCTATT GCGTCCGGGT CGTTTTGACC GTCAAGTGGT GGTTGATCGC CCCGACTATG CGGGTCGTCA GGAAATTCTC AAAGTTCACG CCCGTGGCAA AACCCTCTCC AAAGACATCG ACCTCGATAA AATTGCCCGT CGTACCCCTG GCTTTACGGG GGCTGACCTC TCCAACCTGT TAAACGAAGC CGCTATTTTG GCTGCCCGTC GCAACTTGAC CGAAATTTCC ATGGATGAGG TCAATGACGC GATCGACCGC GTTTTAGCCG GTCCTGAGAA GAAAAACCGC GTCATGAGTG AGAAACGCAA GACTTTAGTG GCTTACCATG AAGCTGGCCA CGCCCTAGTC GGTGCGTTGA TGCCTGACTA CGATCCTGTA CAGAAAATTA GCATTATTCC CCGTGGTCGC GCGGGTGGGT TAACTTGGTT TACTCCTAGT GAAGATCGCA TGGAGTCGGG GTTATATTCC CGTTCCTACC TGCAAAACCA GATGGCTGTC GCTTTAGGCG GTCGTGTTGC TGAAGAGATC ATTTTTGGGG AAGAAGAAGT TACTACCGGG GCTTCTAATG ACTTACAACA GGTCGCACGA GTTGCCCGTC AGATGGTGTC CCGGTTTGGT ATGAGCGATC GCTTGGGACC TGTGGCCTTG GGACGGCAAA ATGGCAATGT CTTCTTAGGT CGGGATATTG CTTCTGATCG GGACTTTTCT GATGAAACAG CAGCCGCGAT CGATGAAGAA GTTCGTCAAT TAGTCGATCA AGCTTACAAG CGGGCTAAGG ATGTTTTGGT CAATAACCGT CACATCCTCG ATAAATTAGC TCAAATGCTG GTGGAAAAAG AAACTGTTGA TGCTGACGAA TTACAGGAAA TTTTGACCAG TAATGAAGTC AAAATGGCTG CCTTAGCCTA A
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Protein sequence | MSKNNKKWRN AGLYALLLIV VLALASAFFD QQPQSREPLT YTEFINQVEN NQITRVSLSA DRAEARVPNP NGGAPLVVNL PNDPDLINIL TKHNVDISVQ PQTDEGLWFR VASSLFLPIL LLVGLFLLLR RAQSGPGSQA MNFGKSKARV QMEPQTQVTF GDVAGIEQAK LELAEVVDFL KNADRFTAIG AKIPKGVLLV GPPGTGKTLL AKAVAGEAGV PFFSISGSEF VEMFVGVGAS RVRDLFEQAK ANAPCIVFID EIDAVGRQRG AGLGGGNDER EQTLNQLLTE MDGFEGNTGI IIIAATNRPD VLDAALLRPG RFDRQVVVDR PDYAGRQEIL KVHARGKTLS KDIDLDKIAR RTPGFTGADL SNLLNEAAIL AARRNLTEIS MDEVNDAIDR VLAGPEKKNR VMSEKRKTLV AYHEAGHALV GALMPDYDPV QKISIIPRGR AGGLTWFTPS EDRMESGLYS RSYLQNQMAV ALGGRVAEEI IFGEEEVTTG ASNDLQQVAR VARQMVSRFG MSDRLGPVAL GRQNGNVFLG RDIASDRDFS DETAAAIDEE VRQLVDQAYK RAKDVLVNNR HILDKLAQML VEKETVDADE LQEILTSNEV KMAALA
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