| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_0178 |
|---|
| Symbol | |
|---|
| ID | 7103521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 177359 |
|---|
| End bp | 178576 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643473291 |
|---|
| Product | geranylgeranyl reductase |
|---|
| Protein accession | YP_002370438 |
|---|
| Protein GI | 218245067 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | [TIGR02023] geranylgeranyl reductase
[TIGR02028] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTAAGGG TCGCCGTTGT TGGTTCAGGA CCGGCTGGGT CTTCCGCAGC CGAAACATTA
GTAAAAGCTG GAATAGAAAC CTATTTATTT GAGCGTAAAT TAGACAACGC TAAACCCTGC
GGTGGTGCTA TTCCCCTGTG TATGGTCAGT GAATTTGACC TACCCCCAGA AATTATCGAT
CGCCGGGTGA GAAAAATGAA AATGATCTCC CCGTCTAACG TCGCTGTTGA TATCAACCTA
GATAACGAAG ATGAATATAT TGGGATGTGT CGTCGGGAAG TCCTTGATGG GTTTTTACGC
GATCGCGCAG CCAAATTAGG GGCAAATTTA ATCAATGGGA CAGTCTATAA ACTCGATATT
CCCACCAATA GCACCGACCC CTACACTCTC CATTATGCCG ACCATTCCAA CGGCAACGCC
CAAGGGGAAA TGAAAACCCT CAAGGTAGAT GTCGTGATCG GGGCTGATGG GGCTAATTCC
CGCATTGCCA AAGCCATTGA CGCGGGAGAT TATAACTATG CGATCGCCTT CCAAGAACGC
ATCCGTCTCC CCCAAGATAA AATGGCCTAC TACGAAGATC TCGCCGAGAT GTACGTCGGT
ACTGATGTTT CCCCTGACTT CTACGCTTGG GTATTCCCTA AATACGACCA TGTAGCCGTC
GGTACAGGCA CGATGAAGGT CAATAAAGCC CTCATTAAAG ACCTACAGGC AGGAATCCGT
ACCCGTGCAG CCCATCGCCT AGAAGGGGGC GAAATCATCA AAGTGGAAGC CCATCCCATC
CCTGAACATC CCCGTCCCCG TCGCGTGGTC GGTCGTGTCG CGTTGGTAGG AGACGCAGCC
GGAACCGTTA CCAAGTCCTC TGGAGAGGGA ATCTATTTTG CGGCGAAATC CGCCCGTATG
TGCGCGGAAA CCATTGTAGA AATGAGCAAC GCCGGTCAGC GCATCCCCAC CGAAGACGAC
TTAAAAGTGT ACCTCAAACG GTGGGATAAG AAGTATGGTA TGACCTACTT AGTTCTCGAT
ATCCTGCAAC GGGTATTCTA TCGTACTGAT GCTTCCCGTG AGGCCTTTGT GGAAATGTGC
GCCGATAAGG ATGTGCAACG GATGACCTTT GATAGTTATC TCTACAAAAC TGTTGTACCC
GCTAATCCTT TAGTCCAGAT GAAAATTACC GCTAAAACCA TCGGTAGTTT GCTACGGGGT
CATGCTTTAG CCCCTTAA
|
|---|
| Protein sequence | MLRVAVVGSG PAGSSAAETL VKAGIETYLF ERKLDNAKPC GGAIPLCMVS EFDLPPEIID
RRVRKMKMIS PSNVAVDINL DNEDEYIGMC RREVLDGFLR DRAAKLGANL INGTVYKLDI
PTNSTDPYTL HYADHSNGNA QGEMKTLKVD VVIGADGANS RIAKAIDAGD YNYAIAFQER
IRLPQDKMAY YEDLAEMYVG TDVSPDFYAW VFPKYDHVAV GTGTMKVNKA LIKDLQAGIR
TRAAHRLEGG EIIKVEAHPI PEHPRPRRVV GRVALVGDAA GTVTKSSGEG IYFAAKSARM
CAETIVEMSN AGQRIPTEDD LKVYLKRWDK KYGMTYLVLD ILQRVFYRTD ASREAFVEMC
ADKDVQRMTF DSYLYKTVVP ANPLVQMKIT AKTIGSLLRG HALAP
|
|---|
| |