| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_0117 |
|---|
| Symbol | |
|---|
| ID | 7104708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 120883 |
|---|
| End bp | 123858 |
|---|
| Gene Length | 2976 bp |
|---|
| Protein Length | 991 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643473232 |
|---|
| Product | delta-1-pyrroline-5-carboxylate dehydrogenase |
|---|
| Protein accession | YP_002370379 |
|---|
| Protein GI | 218245008 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0506] Proline dehydrogenase
[COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01237] delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative
[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTCACAC AAATTGATGC AAATTCCTAC GAAAACAAAA CCCAATCAAT AGCGAGGGAA
TTAATCACCC AAACCCGCGA AAAACGCTCT TTATGGGATA AAATCGGCGA TCAAATGCGC
CTGGATGATA AACTCATGGG ATGGGCAATG GCTAACCCAG GGTTAAGGGT ACAATTATTC
CATTTTATTG ATACCTTACC CGCATTACGC AGCAATGCCG AAATTGCTCA TCATTTACAG
CAATATTTAG GAGTAGAATC TGTTGAATTG CCATCAGCAT TAAAAGGCAT TCTGAACTTT
ACTGACTATC AATCTGCCCC GGCACAATTA GCAGCAGCAA CTGTCAGTAA ATCGGTTGAA
ACATTAGCCT TTAAATATAT CGCAGGAGAG ACGGTACAGC AGGTCATCAA AGCAGTTGAG
AAGCTGCGAA AAGAAAAAAT GGCTTTTAGT ATTGACCTAC TCGGAGAAGC AGTTATTACC
GAATCTGAAG CCAAAGCTTA CTTTCAAAAG TACCTCGACT TGATGGAAGA ATTATCCCAA
CAAAGTCAGA AATGGTCGAA GGTTCCAGAA ATCGATGAAG CCGATGGAGA AGCCTTACCA
AAAGTTCAAG TTTCTGTCAA ATTAACGGCG TTTTATTCCC AATTTGATCC CATCGATCCT
GAAGGAAGTA AAGACAAAGT TTGTGCCTTT ATTCGAGTAT TATTGCGTCG TGCCCAAGAA
TTAGGGGTTG CTGTCCATTT TGATATGGAG CAATATGTCT ATAAAGACCT CACTTTATCG
ATTCTAAAAG AATTACTGTT AGAAGAGGAA TTTCTGACGA GAACTGATAT TGGGGTCACA
TTACAAGCTT ATTTAAGAGA CTCCCAACAG GACTTACATG ATTTAATTGC TTGGGCAAAA
CAACGAGGTT ATCCTATTAC AATTAGACTG GTAAAAGGAG CCTATTGGGA TCAAGAAACC
ATTAAAGCGA GTCAAAATCA TTGGCCACAA CCTGTATTTA ACGATAAAGC AGCAACAGAC
ATCAATTTTG AACAGATGAC TCAGATATTG CTAGAAAATC ATCAATATTT GTATGCTGCT
ATCGGTTCCC ATAACGTCCG TTCCCAAGCT AAAGCGATCG CGATCGCCCA AACCCTCAAT
GTCCCGCGTC GTGCCTTCGA GATGCAGGTA CTATATGGGA TGGGGGATCA ACTGGCAAAA
GCCTTAGTCA AACAAGGCTA TCGCGTACGG GTGTACGCCC CCTACGGCAA CCTCTTACCC
GGAATGGCCT ATCTCATCCG CCGTTTATTG GAAAATACGG CAAATAGTTC ATTTTTACGG
CAAAACTTGG AAGAAAGACC TGTAGAAGAA CTCATTGCGC CTCCTGTCAT AAAAGGAGAA
ACTGAGATGA AAGAAGCACA AAAAGTCACT TTTGTCAATG CCCCTGACAC CGATTATTCC
AGGGAAGTCT TACGGGAAAG AGCCCAGAAA GCCCTCGCTA AAGTCAAAGA TTCTCTGGGT
AAAACCTATT TACCCCTGAT TAACGGCGAA TACGTCCAAA CCGATGTTAT TATCGACTCC
GTTAACCCCT GCAACCCGTC GGAAATTGTC GGACACATCG GCTTAATGTC CATTGAACAG
GCGGAACAAG CCCTAAATGC AGCAAAAGCA GCTTTTCCCG CTTGGAAAAA GACCCCTGCT
ACCGAAAGAG CGAAAATCCT GCGGAAAGCG GCTGATTTGA TGGAAGAACG CCGTCATGAA
CTTTCCGCTT GGGTATGTCT AGAAGTCGGG AAAATCTTGC AACAAGCGGA TGCAGAAGTC
TCCGAGGCGA TCGACTTTTG TCGTTATTAT GCCGCCGAAA TGGAACGGTT AGACGCAGGA
TATAGCTATG ATATCGCTGG AGAAACCAAC CGCTACCAAT ATCAACCCAG AGGTATTGCT
TTGGTGATCT CCCCCTGGAA TTTCCCCATG GCGATCGCTA CAGGAATGAC TGTCGCTGCG
TTAGTAGCAG GAAATTGTAC CCTACTCAAA CCTGCCGAAA CATCTAGCGT CATTGCCGCC
AAAATGGTCG AAATTCTGGT AGAAGCGGGT ATTCCCAAAG GCGTTATTCA ATACGTCCCC
GGAAAGGGTT CTCAAGTCGG TGCTTATATG GTCAACCATC CTGACGTACA TTTGATCGCC
TTTACGGGAT CGCGGGAAGT GGGTTGTCGC ATCTATGCAG ACGCAGCTAT TCTTCAACCC
GGACAAAAAC ACCTAAAACG GGTTATTGCC GAAATGGGGG GCAAAAACGC TATTATTGTC
GATGAAAGTT GCGATCTCGA TCAAGCGGTG GCAGGGGCAG TCTTTTCCGC GTTTGGCTAT
TCCGGTCAAA AATGTTCGGC TGCGTCGCGT ATTATCGTGT TAGACCCCGT TTACGAGGCA
TTTCTAGAAC GGTTTGTTGA GGCCACGCGA TCGCTAAATA TCGGACCCAC CGATCACCCC
TCTACCCAAG TCGGACCGGT TATCGATGCC ACGGCGCAAA AGCGTATTCA GGAGTACATT
GAAATCGGCA AACAACAGTC AACCCTAGCG TTACAGATGG AGTCTCCCGA AAACGGCTAT
TTTGTCGGCC CCACCATCTT TAGTAATGTG TCACCATCGG ATACCATCGC GCAAGAGGAG
ATTTTTGGTC CTGTGGTTGC AGTAATACGG GTGAAAAACT TTGATGAAGC GTTAGCAGTA
GCCAATGGGA CAGACTACGC TTTAACTGGG GGGTTGTACT CTCGCAGTCC CGAACACATC
GAACGAGCCC AAAATGAGTT TGAAGTAGGC AACCTGTACA TCAATCGTAC CATTACAGGG
GCGATCGTCG CTCGTCAACC CTTTGGCGGT TTCAAGCTGT CTGGGGTGGG GTCAAAAGCA
GGGGGTCCTG ACTATTTGTT ACAGTTCCTC GAACCTCGTC ATATCACCGA AAACATTCAG
CGTCAAGGGT TTGCACCCAT TGAAGGCAAT GAGTAA
|
|---|
| Protein sequence | MVTQIDANSY ENKTQSIARE LITQTREKRS LWDKIGDQMR LDDKLMGWAM ANPGLRVQLF
HFIDTLPALR SNAEIAHHLQ QYLGVESVEL PSALKGILNF TDYQSAPAQL AAATVSKSVE
TLAFKYIAGE TVQQVIKAVE KLRKEKMAFS IDLLGEAVIT ESEAKAYFQK YLDLMEELSQ
QSQKWSKVPE IDEADGEALP KVQVSVKLTA FYSQFDPIDP EGSKDKVCAF IRVLLRRAQE
LGVAVHFDME QYVYKDLTLS ILKELLLEEE FLTRTDIGVT LQAYLRDSQQ DLHDLIAWAK
QRGYPITIRL VKGAYWDQET IKASQNHWPQ PVFNDKAATD INFEQMTQIL LENHQYLYAA
IGSHNVRSQA KAIAIAQTLN VPRRAFEMQV LYGMGDQLAK ALVKQGYRVR VYAPYGNLLP
GMAYLIRRLL ENTANSSFLR QNLEERPVEE LIAPPVIKGE TEMKEAQKVT FVNAPDTDYS
REVLRERAQK ALAKVKDSLG KTYLPLINGE YVQTDVIIDS VNPCNPSEIV GHIGLMSIEQ
AEQALNAAKA AFPAWKKTPA TERAKILRKA ADLMEERRHE LSAWVCLEVG KILQQADAEV
SEAIDFCRYY AAEMERLDAG YSYDIAGETN RYQYQPRGIA LVISPWNFPM AIATGMTVAA
LVAGNCTLLK PAETSSVIAA KMVEILVEAG IPKGVIQYVP GKGSQVGAYM VNHPDVHLIA
FTGSREVGCR IYADAAILQP GQKHLKRVIA EMGGKNAIIV DESCDLDQAV AGAVFSAFGY
SGQKCSAASR IIVLDPVYEA FLERFVEATR SLNIGPTDHP STQVGPVIDA TAQKRIQEYI
EIGKQQSTLA LQMESPENGY FVGPTIFSNV SPSDTIAQEE IFGPVVAVIR VKNFDEALAV
ANGTDYALTG GLYSRSPEHI ERAQNEFEVG NLYINRTITG AIVARQPFGG FKLSGVGSKA
GGPDYLLQFL EPRHITENIQ RQGFAPIEGN E
|
|---|
| |